Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00105 ATGCAGGGAATGGTGAGTGAGTTTAAGGTTCCTAAGGAGGGAAACCCAACATTGGAAAAGTATCAGTTTCATTGGTTGTATGCTAATGGATTACTGGGTATTATATTCACCTTTGGCCTTCTCTATACTTCCTTAAAAAGCAGAAGAGCAAGGTCATGGTTATATGGAACAGGGTGGTTCAGAAGTTTCATTGCAGATTATGGGGTGCCTCTCATGGTGCTGCTCTGGACAGCCCTATCATTCACAGTACCAAGTAAAGTTCCTTCTGGAGTTCCAAGAAGACTTGTTTCTCCTCTTGCTTGGGATTCCACATCTTTGCATCATTGGACTGTCATCAAAGACATGGGCAAGGTTTCACCAACATATATATTTGCTGCTTTTATTCCTGCCATAATGATAGCAGGGCTTTATTTCTTTGATCACAGTGTTGCTTCACAGTTAGCACAGCAGAAGGAATTCAACCTAAAGAAGCCTTCTGCATATCACTATGACATATTGCTACTAGGATTCATGGCATGTTTCTGCCTTAAACATAGTTTTTTAAATACTTTGCTTTGTGGATTAATTGGCCTGCCTCCTTCAAATGGAGTTCTGCCTCAATCCCCTATGCACACCAAGAGCCTGGCTGTTCTCAAGAAACAGTTGATAAGAAGAAAGATGGTTAAAAGTGCCAAAGAAAGCATAAAGCAGAAAGCAAGCAAATCAGAAATCTATGGGAATCTGCAGGCTGTGTTTATAGAAATGGATAGCACTCAAGATAACCATTCAGTGGCCAAAGAACTAGCTGAACTAAAAGAGATTGTCCTAAATGGTGAAGATAAAGGAGAAAACAAGGAGAGTAATTTTGATCCTGAGAAACACATTGATGCATATCTACCAGTGAGAGTAAATGAGCAGAGAGTGAGCAATCTCTTACAATCACTCCTTGTTGGAGCATCAGTCTTTGCTATGCCTGCCATAAAAAAGATTCCAACTTCAGTTCTATGGGGATACTTTGCATACATGGCCATTGATAGTCTTCCAGGAAATCAATTCTGGGAAAGAATACTGCTACTCTTTGTGACACCTAGTAGGTGGTACAAGTTGTTGGAAGGGGATCATGCTTCTTTTGTTGAGTCAGTACCATTCAAACATATAATGTTATTCACACTGTTCCAATGTGTGTATTTCTTGGTTTGTTTTGGAGTGACATGGATTCCAATAGCTGGAATATTGTTCCCATTGCCTTTCTTTGTGTTGATCACACTGAGGCAGCATATTCTCCCCAAATTCTTCATTCCTCACCATCTAAGGGAACTAGATGCTGCTGAATATGAAGAAATAGTAGCAGGTGCTCCAAGATTGAGTCTCAACATGTCTTTTAAGGAGGTGGAATCACCTATTGTTGGATCAAGAGAAAAAGGTGATGCTGAAATGTTAGATGAGTTAACTACTAACAGAGGAGAGGTGAAGGTCAGAACTTTTAGCTTCAATGAAGAAAGACAAAGCCAGGTTTATCCAGATGAAAGAGTGAGTGAAATGGATCCCACACTCACACAATGA 1542 0.4014 MQGMVSEFKVPKEGNPTLEKYQFHWLYANGLLGIIFTFGLLYTSLKSRRARSWLYGTGWFRSFIADYGVPLMVLLWTALSFTVPSKVPSGVPRRLVSPLAWDSTSLHHWTVIKDMGKVSPTYIFAAFIPAIMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMACFCLKHSFLNTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMVKSAKESIKQKASKSEIYGNLQAVFIEMDSTQDNHSVAKELAELKEIVLNGEDKGENKESNFDPEKHIDAYLPVRVNEQRVSNLLQSLLVGASVFAMPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWYKLLEGDHASFVESVPFKHIMLFTLFQCVYFLVCFGVTWIPIAGILFPLPFFVLITLRQHILPKFFIPHHLRELDAAEYEEIVAGAPRLSLNMSFKEVESPIVGSREKGDAEMLDELTTNRGEVKVRTFSFNEERQSQVYPDERVSEMDPTLTQ 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00105 513 PANTHER ANION EXCHANGE PROTEIN 2 504 IPR003020 GO:0005452|GO:0006820|GO:0016020
Aip08g00105 513 PANTHER BORON TRANSPORTER 4-RELATED 2 504 - -
Aip08g00105 513 Pfam HCO3- transporter family 294 384 IPR011531 GO:0006820|GO:0016021
Aip08g00105 513 Pfam HCO3- transporter family 21 214 IPR011531 GO:0006820|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00105 Aip-Chr8 589198 591414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00105 1 512 Antiporters AT1G15460 70.019 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00105 K24194 - gmx:100811184 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03312 06 129648400 129651781 Aip08g00105 08 589198 591414 ECH
Aip08g00105 08 589198 591414 Aip08g00105 08 589198 591414 ECH