Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00076 ATGGCGCAAATTCTACTGCACGGGACTCTCCATGTCACCATCTATGAGGTCGATAAGCTCAAGACAAGTGGTGGCAATGTTTTCACCAAGCTGGTGCAAAACATCGAGGAGACAGTTGGTTTTGGAAAAGGAGTTACCAAACTGTATGCAACCATTGATCTGGAAAAAGCACGAGTTGGAAGAACCAGGATTATAGAAAAAGACCATAGTAATCCCAGATGGTACGAATCTTTTCACATTTACTGTGCCCACATGGCATCAAACATCATTCTTGGATGGAGTGCTAAATTCCCTGGTGTTCCTTACACCTTCTTCTCGCAAAGAAGAGGCTGCAAGGTTTCTCTTTACCAGGATGCTCATGTCCCTGATAATTTTGTCCCCAAAATACCCCTTGCTGGAGGCCAGACTTACCAGCCTCATAGGTGCTGGGAGGATGTGTTTGATGCAATCGAAAAAGCGAGGCACTTGATATACATAACCGGTTGGTCTGTTTACACTGAGATAACATTGGTGAGGGATACAAGGAGGCCAAAGCCTGGTGGAGACTTAACGATTGGTGAGCTTCTCAAGAAGAAGGCGAATGAGGGTGTCAGAGTCTTGATGCTTGTTTGGGATGACAGAACATCTGTTCCATTGTTGAAAAAAGATGGGTTGATGGCTACTCATGATGAAGAAACTGAGAAGTACTTCCAAGGAACTGAAGTGCATTGTATTTTGTGCCCTCGGAATCCTGATGATGGTGGAAGCATTATTCAGGATTTGCAAATCTCTACAATGTTTACTCATCACCAGAAGATTGTGGTGGTGGATAGTGATATGCCTAGTGGAGATTCGGGTAAGAGAAGGATAGTGAGCTTTGTTGGGGGTATTGATCTCTGTGATGGAAGATATGACACTCAATTCCACTCACTTTTCAGAACCTTGGACACCGCACACCATGATGACTTTCATCAGCCAAACTTTGCCGGTGCTTCCATCATGAAAGGTGGTCCTAGGGAGCCTTGGCATGACATCCACTCTCGCCTCGAAGGGCCTATTGCATGGGATGTTCTGTTCAACTTCGAGCAGAGATGGAGGAAGCAAGGTGGAAAGGACTTACTCATTCCACTGAGAGAGCTTGAAGATGTCATCATCCCGCCATCCCCAGTAACATTCGCGGAAGATCCCGAGACATGGAATGTTCAGTTATTCAGATCAATTGATGGTGGAGCTGCTTTTGGCTTCCCAGAGACTCCTGAAGATGCTGCCAGAGCTGGCCTTGTTAGTGGAAAGGATAACATCATAGACCGTAGCATCCAAGATGCTTATATCCATGCAATTAGGCGCGCAAAGAATTTCATCTATATCGAGAATCAGTATTTCCTGGGAAGCTGTTTTGGATGGAACCCTGATGGCATTAAGCCTGAGGACATTGGTGCTTTGCATCTAATTCCAAAGGAGCTTTCACTTAAGATTGTAAGCAAAATCGAAGCCGGGGAGAGGTTCACTGTGTACATTGTGGTTCCAATGTGGCCAGAGGGGTTCCCAGAGAGTGGTTCAGTTCAAGCCATATTGGATTGGCAGAGGAGGACAATGGAGATGATGTACAAGGATATAGTTGAGGCACTCAATGCCAAGGGAATTGTGGAAGATCCCAGAAACTATTTGACATTCTTCTGCCTTGGCAACCGGGAAGTCAAGAAGCCAGGAGAATATGAGCCTTCAGAGAGACCAGACCCTGATTCTGATTACATAAAAGCCCAGGAGAACCGTCGATTCATGATTTATGTCCATGCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGATCCGCAAACATCAACCAGAGATCAATGGATGGTGCAAGAGACTCGGAAATAGCCATGGGAGCTTATCAGCCATACTATTTGAGTGCAAGGGAGCTAGCAAGGGGACAGATCCATGGTTTCCGCATTGCGCTGTGGTATGAGCACCTTGGCATGATCAGAGAATCCTTCCTCCAACCTGAGAGTGAAGAATGTGTCAAGATGGTGAATCAGGTTGCTGACAAGTATTGGGATCTGTATTCCAGTGAGTCCCTTGAGCATGACCTCCCCGGCCACCTTCTGCGCTACCCCGTTGGCGTTGCCGGTGATGGAACTATCACCGAGCTTCCAGGATTTGAGTTCTTCCCTGACACAAAGGGTCGTGTTCTTGGAACCAAAACTGATTACTTGCCCCCTATCCTTACTACTTAA 2223 0.4606 MAQILLHGTLHVTIYEVDKLKTSGGNVFTKLVQNIEETVGFGKGVTKLYATIDLEKARVGRTRIIEKDHSNPRWYESFHIYCAHMASNIILGWSAKFPGVPYTFFSQRRGCKVSLYQDAHVPDNFVPKIPLAGGQTYQPHRCWEDVFDAIEKARHLIYITGWSVYTEITLVRDTRRPKPGGDLTIGELLKKKANEGVRVLMLVWDDRTSVPLLKKDGLMATHDEETEKYFQGTEVHCILCPRNPDDGGSIIQDLQISTMFTHHQKIVVVDSDMPSGDSGKRRIVSFVGGIDLCDGRYDTQFHSLFRTLDTAHHDDFHQPNFAGASIMKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLIPLRELEDVIIPPSPVTFAEDPETWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSCFGWNPDGIKPEDIGALHLIPKELSLKIVSKIEAGERFTVYIVVPMWPEGFPESGSVQAILDWQRRTMEMMYKDIVEALNAKGIVEDPRNYLTFFCLGNREVKKPGEYEPSERPDPDSDYIKAQENRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYYLSARELARGQIHGFRIALWYEHLGMIRESFLQPESEECVKMVNQVADKYWDLYSSESLEHDLPGHLLRYPVGVAGDGTITELPGFEFFPDTKGRVLGTKTDYLPPILTT 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00076 740 SMART pld_4 258 296 IPR001736 GO:0003824
Aip08g00076 740 SMART pld_4 586 613 IPR001736 GO:0003824
Aip08g00076 740 SUPERFAMILY Phospholipase D/nuclease 386 669 - -
Aip08g00076 740 SUPERFAMILY Phospholipase D/nuclease 93 377 - -
Aip08g00076 740 PANTHER PHOSPHOLIPASE D 2 91 IPR015679 -
Aip08g00076 740 PANTHER PHOSPHOLIPASE D 94 740 IPR015679 -
Aip08g00076 740 Pfam Phospholipase D Active site motif 258 296 IPR001736 GO:0003824
Aip08g00076 740 Pfam Phospholipase D Active site motif 587 613 IPR001736 GO:0003824
Aip08g00076 740 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 89 IPR035892 -
Aip08g00076 740 Gene3D C2 domain 4 94 IPR035892 -
Aip08g00076 740 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 258 296 IPR001736 GO:0003824
Aip08g00076 740 Gene3D Endonuclease Chain A 132 373 - -
Aip08g00076 740 PANTHER PHOSPHOLIPASE D 2 91 - -
Aip08g00076 740 PIRSF PLD_plant 91 740 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Aip08g00076 740 PIRSF PLD_plant 1 94 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Aip08g00076 740 CDD PLDc_pPLDalpha_2 424 633 - -
Aip08g00076 740 Gene3D Endonuclease Chain A 409 632 - -
Aip08g00076 740 Pfam Phospholipase D C terminal 659 730 IPR024632 -
Aip08g00076 740 Pfam C2 domain 8 88 IPR000008 -
Aip08g00076 740 PANTHER PHOSPHOLIPASE D 94 740 - -
Aip08g00076 740 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 586 613 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00076 Aip-Chr8 448717 452109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00076 1 91 Phospholipase D Gene Family (Wang group) AT3G15730 65.591 2.16e-30 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00076 K01115 - egr:104450554 1217.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00238 09 2155640 2159379 Aip08g00076 08 448717 452109 ECH
Aip08g00076 08 448717 452109 Aip08g00076 08 448717 452109 ECH
Aip08g00076 08 448717 452109 Aip09g00238 09 2155640 2159379 PCT