Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00070 ATGAAGTCTCGTTCTTCTTCACAAACATATCAAGTCAATATACAACTTGTTCGGTCTCCTCCTTACAACTTCCATAACCTGTCAAGATCCACAAACCTTTCTTCCTTCATCCCCTTTGGTTTCATCCTGCTACAACAACTCTTCATAATTATTACTCATTTTTTATATAGTCTTAAGGTACAGCATGCCTGCTTCATCGTTTCTGCCAGCTACTGCAAAATAAGCGATCAAATCATGGGGCTGTTGAGATGTGGAGCCTTGTTTTTGTGTGTGCTGCTTCTGTCCACAACCTGCTTGGGTAAAGAACAGCACATTCAGAAGATATATCCTGGCTTCAGTGCATCTAAGCTGGATTGGGACGATTATAATGGAATGTTCTTGCTATCCAACAACTCGGCTTTCGCCTTCGGATTCTTTGGTACCCTTGATGTTTCCTTGTTTGTTCTAGTAGTCCTTCACCTGAGTAGCTACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTTGTTAGGAATTCTAATAGATTTGTGTTAGAACATAGCGGGAATGCATATTTGGAGGGTGGGAACGGTGTGGTTTGGTCAACAAACACAACAGGACAAAGAGTAAGATCCATGGAGTTGCAGGATTCAGGGAATTTGGTGTTGATTGGGGAAAATGGGACATCCATTTGGCAGAGTTTTGACCATCCCACTGATACTCTTTTGCCTGGTCAAGCCTTTGTGGAAGGAATGACACTAAAAACCTTTCCCAACCGCAACAACTTGTTCCATTTTCTTGCTTATAAGGCAGGTGATTTGGTTCTCTATGCAGGATTTGAGCCCCCGCAACAATACTGGTCAAGCCAAAAGAATTTCAGTGGCAAGATTCATTCTGCTTCTCTGGTGTCCAATTCATGGAATTTCTATGACAAGAACGGGGATTTGCTGGGGAGAACTGTTTTCTCTGACCATTCAGATCCTGACTCATTTTTGATCCTTACAATGACTTCTACGGAACTTCTATATGTTGGTGAGAAGCTTGACTATTTTGCACTTGATTATGTTGCACCGGTTTCAAAATCAAACCTGAATGCCTGCAAAGAAGCTTGTTTGGGAAACTGCTCTTGCCTTGTGCTTTTCTTTGAAAACACCACCGGGAGATGCTTTCATTTTGATCAGACCGGAAGCTTCCAACGATTCAAGGGGGGTCCCGGCGGTTTTACTTCATATATGAAGGTGGCCATTGATGACGGAAATGACCACAAAAAGCAAAAGAATGGGATACTGCTAATTGTTGCCATAGTAGTCTTCACAGTTCTGGTCATTGTTAGTCTTGTGGCAGGGTTCTGGTACTATAACAAGAAGATGAATCTTGTTAAGCATGAACAAGACACATTGGAGGAGGATGATTTCTTGGATGGTCTCTCCGGAATGCCTACTCGGTTTACTTATGGTGCTCTCTCTACGGTGACAAAGAACTTCTCCACGAAAATTGGTGAAGGAGGTTTTGGCTCTGTGTATCTTGGTGTGCTTGAAGATGGAACTCAGTTGGCCGTGAAAAAATTGGAAGGTCTTGGACAAGGGACAAAAGAGTTCAAGGCTGAAGTGTCTATAATTGGAAGCATTCATCATGTTCATCTGGTCAAGCTTAAAGGCTTCTGCGCTGAGGGTTCTCATCGCCTTCTCGTCTATGAATACATGGGGAGGGGATCTCTGGACAAATGGATCTTCAAGAACAGTGAAAACACTTTCTTGTTGACTTGGGATACAAGGTTCAACATTGCAATAGGCACAGCCAAGGGATTGGCCTATCTTCATGAGGAGTGTGAGGTGAAGATTGTCCATTGTGATATTAAGCCGCAGAATGTTCTTCTTGATGATAATTTCACTGCTAAAGTTTCAGATTTCGGACTGGCTAAGCTAATGAACCGCGAACAAAGCCATGTGGTTACAACTCTAAGGGGCACAAGAGGGTATCTAGCACCAGAATGGATCACTAACTATGCAATTTCTGAGAAGAGTGATGTGTTCAGCTATGGCATGGTCTTGCTGGAGATTATTGGAGGAAGGAAGAACTATGATCAGTGGGAAGGCCCAGAGAAAGTGCATTTTCCTTCTTATGTCTTCAGAATGATGGAGGAAGGGAGACTGAGAGAAGTTATTGACAAAAGGATAGACATTGATGATAAGGATGAAAGGGCTATGATTGCTCTCAAAGTTGCTCTATGGTGTATACAAGATGATGTCAGTTTGAGACCTTCCATGACAAAGGTAGTTCAAATGCTTGAAGGTCTCTCCCCTGTACCTGATCCACCGTTATCTCAGTCTAGTTCTTTCACAGCCTTCCTGAAAATGAGTAGTGGAGAAGCTTCTTCTTCAGGACAGGGAAGCTTCTATAGTAACGTGCCACTTTCTTGTGTTCAATTATCTGGACCAAGATGA 2421 0.4279 MKSRSSSQTYQVNIQLVRSPPYNFHNLSRSTNLSSFIPFGFILLQQLFIIITHFLYSLKVQHACFIVSASYCKISDQIMGLLRCGALFLCVLLLSTTCLGKEQHIQKIYPGFSASKLDWDDYNGMFLLSNNSAFAFGFFGTLDVSLFVLVVLHLSSYKVVWTANRGLLVRNSNRFVLEHSGNAYLEGGNGVVWSTNTTGQRVRSMELQDSGNLVLIGENGTSIWQSFDHPTDTLLPGQAFVEGMTLKTFPNRNNLFHFLAYKAGDLVLYAGFEPPQQYWSSQKNFSGKIHSASLVSNSWNFYDKNGDLLGRTVFSDHSDPDSFLILTMTSTELLYVGEKLDYFALDYVAPVSKSNLNACKEACLGNCSCLVLFFENTTGRCFHFDQTGSFQRFKGGPGGFTSYMKVAIDDGNDHKKQKNGILLIVAIVVFTVLVIVSLVAGFWYYNKKMNLVKHEQDTLEEDDFLDGLSGMPTRFTYGALSTVTKNFSTKIGEGGFGSVYLGVLEDGTQLAVKKLEGLGQGTKEFKAEVSIIGSIHHVHLVKLKGFCAEGSHRLLVYEYMGRGSLDKWIFKNSENTFLLTWDTRFNIAIGTAKGLAYLHEECEVKIVHCDIKPQNVLLDDNFTAKVSDFGLAKLMNREQSHVVTTLRGTRGYLAPEWITNYAISEKSDVFSYGMVLLEIIGGRKNYDQWEGPEKVHFPSYVFRMMEEGRLREVIDKRIDIDDKDERAMIALKVALWCIQDDVSLRPSMTKVVQMLEGLSPVPDPPLSQSSSFTAFLKMSSGEASSSGQGSFYSNVPLSCVQLSGPR 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00070 806 SUPERFAMILY Protein kinase-like (PK-like) 469 757 IPR011009 -
Aip08g00070 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 156 282 IPR036426 -
Aip08g00070 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Aip08g00070 806 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 328 806 - -
Aip08g00070 806 Pfam Protein kinase domain 488 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00070 806 Gene3D - 122 229 IPR036426 -
Aip08g00070 806 CDD B_lectin 122 230 IPR001480 -
Aip08g00070 806 ProSiteProfiles Protein kinase domain profile. 485 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00070 806 ProSitePatterns Protein kinases ATP-binding region signature. 491 514 IPR017441 GO:0005524
Aip08g00070 806 SMART serkin_6 485 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00070 806 Gene3D Transferase(Phosphotransferase) domain 1 560 762 - -
Aip08g00070 806 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 80 325 - -
Aip08g00070 806 ProSiteProfiles Bulb-type lectin domain profile. 113 228 IPR001480 -
Aip08g00070 806 CDD STKc_IRAK 491 758 - -
Aip08g00070 806 Pfam D-mannose binding lectin 159 240 IPR001480 -
Aip08g00070 806 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 80 325 - -
Aip08g00070 806 SMART blect_4 118 230 IPR001480 -
Aip08g00070 806 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 328 806 - -
Aip08g00070 806 Gene3D Phosphorylase Kinase; domain 1 448 559 - -
Aip08g00070 806 CDD PAN_AP_plant 318 407 - -
Aip08g00070 806 PIRSF SRK 338 803 IPR024171 GO:0004674
Aip08g00070 806 PIRSF SRK 78 336 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00070 Aip-Chr8 422793 425414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00070 423 765 Receptor kinase-like Gene Family AT5G20050 43.526 1.52e-92 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip08g00070 Pkinase 5.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00070 - - gmx:100816004 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00070 08 422793 425414 Aip08g00070 08 422793 425414 ECH