Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00064 ATGGCGTTTTGCCCCATGTTTTGTTGCGGAAATGTTTCCGATCGCAAGGCACGGGGGAAGAAACAACCTCCATGGCGGGTGTTTTCTCTGAAGGAATTACATTCAGCTACCAATAATTTCAACTATGATAACAAGCTTGGCGAAGGCGGATTCGGGAGTGTCTACTGGGGTCAGCTTTGGGATGGATCACAGATTGCTGTGAAAAGATTGAAAGTTTGGAGCAGCAAAGCAGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGGGTTCGACACAAGAATCTTCTAAGTCTGCGTGGCTATTGCGCTGAAGGTCAGGAACGATTAATTGTGTATGACTACATGCCGAATTTGAGCCTAGTCTCTCATCTTCATGGGCAGCACTCGGCTGAAAGCCTTCTTGATTGGAAGCGACGGATGATTATTGCAATTGGCGCTGCCGAGGGAATTGCGTATCTTCACCACCAAGCAACACCACACATCATTCATAGAGATATCAAAGCAAGCAATGTGTTGTTGGATTCAGATTTCCAAGCACAGGTTGCTGATTTTGGTTTCGCCAAGTTGATCCCGGATGGGGCAACGCATGTGACTACTAGAGTTAAAGGCACTCTTGGCTACTTAGCACCAGAGTATGCTATGTTAGGTAAAGCAAATGAGAGTTGTGATGTATACAGTTTCGGTGTTCTTCTTCTAGAACTTGCCAGTGGCAGAAAACCACTTGAGAAACTCAGTAATGCAGTGAAGCGCACCATCAGTGATTGGGCACTGCCTTTGGCTTGTGAGAAGAAATTCAGGGAAATTGCAGATTCAAGACTTAATGGGGACTATGTGGAGGAAGAACTTAGAAGAGTTGTTTTGATTGCTCTTATATGTGCTCAGAGTCAAGCTGAGAAAAGACCAACCATGCTTGAGGTGGTGGAGCTACTCAAGGGTGACTCCAAAGATAAGATTTCTCAGTTGGAAGCCAATGAACTCTTTATCAGCTCTGTAACTGTTGGACATGACCATGGAAGCAGTTCAGACATCATTTCAGAGGAGAACCAATCAAAACATCAATTGGAACACATGAAAAGTGCATAG 1086 0.4448 MAFCPMFCCGNVSDRKARGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSSKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLVSHLHGQHSAESLLDWKRRMIIAIGAAEGIAYLHHQATPHIIHRDIKASNVLLDSDFQAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGVLLLELASGRKPLEKLSNAVKRTISDWALPLACEKKFREIADSRLNGDYVEEELRRVVLIALICAQSQAEKRPTMLEVVELLKGDSKDKISQLEANELFISSVTVGHDHGSSSDIISEENQSKHQLEHMKSA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00064 361 MobiDBLite consensus disorder prediction 339 361 - -
Aip08g00064 361 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00064 361 PIRSF ILK 10 324 - -
Aip08g00064 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Aip08g00064 361 Gene3D Transferase(Phosphotransferase) domain 1 116 328 - -
Aip08g00064 361 PANTHER OS01G0253100 PROTEIN 1 340 IPR045271 GO:0004714|GO:0006468
Aip08g00064 361 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00064 361 Gene3D Phosphorylase Kinase; domain 1 11 115 - -
Aip08g00064 361 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Aip08g00064 361 Pfam Protein tyrosine and serine/threonine kinase 42 311 IPR001245 GO:0004672|GO:0006468
Aip08g00064 361 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Aip08g00064 361 PANTHER - 1 340 - -
Aip08g00064 361 CDD STKc_IRAK 46 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00064 Aip-Chr8 392054 393735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00064 28 317 Trihelix Transcription Factor Family AT1G70460 51.014 6.86e-95 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Aip08g00064 PK_Tyr_Ser-Thr 8.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00064 - - gmx:100788153 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00064 08 392054 393735 Aip08g00064 08 392054 393735 ECH
Aip08g00064 08 392054 393735 Aip09g00217 09 1902923 1906287 PCT