Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00061 ATGGCCGTTATTTCTTTCTCTCTTGTCCCTTCTCTGCTCCCACCTTCTTCTTCGTCTTCGTCTTCTTCGTGCTTCTGTGGGGGGATCCCTCTCCGTTCCCACAAAAGCTTCCTTTCCATTCACTCTGCTTCTCCCTTTCCTTCTCTCGCTTCTAATTCCAAGTTCTTCGGCGGTGGCGGCTCTAGCCGGCGATTTCACACGGTGGTTTCTGCCTCCGCTGACTACTATGCTACTCTTGGTGTCCCCAAATCCGCCACCGGCAAGGAAATCAAAGCAGCTTATCGAAGGTTAGCTCGTCAGTACCATCCCGATGTAAACAAGGAACCTGGAGCAACTGAAAAATTCAAAGAGATCAGTGCTGCTTATGAGGTGCTATCAGATGATAAAAAGCGGGCTTTGTATGATCAATATGGTGAGGCAGGAGTTAAAAGTACCGTTGGAGGAGGATCAAGTGCCTATACGACCAATCCATTTGATTTATTTGAGACTTTTTTTGGGCCAAGTATGGGTGGCTTTGGTGGTGGCATGGATCCTACTGGATTTGGAACACGTAGAAGTACTGTTACTAAGGGTCAAGACATCCGGTATGATTTCTCCTTGACATTTTCTGAGGCAATTTTCGGAACAGAGAAGGAATTTGACCTTTCTCATTTGGAAACATGTGAAGTCTGTAGTGGTACTGGAGCAAAGATTGGCTCTAAGATGAAAATATGTTCAACTTGTGGTGGGAGGGGTCAGGTGATGAGGACTGAACAAACACCTTTCGGATTGTTCTCACAGGTTTCAGTTTGCCCGACCTGTGGAGGTGATGGTGAAATCATATCTGAATATTGCCGCAACTGCAGTGGTGAAGGACGTATTCGAGTTAAGAAAAATATCAAAGTTAAAGTTCCTCCAGGTGTTAGCTCAGGCAGTATTCTTAGAGTTACTGGGGAAGGTGATGCTGGACCAAGAGGGGGTCCTCCAGGAGATCTTTATGTATATCTAGATGTGGAAGAGATACCAGGAATCCAAAGAGATGACATCAATCTCCGCTCAACAATATCAGTCAGTTACCTAGATGCTATATTAGGGTCTGTTGTGAAGGTCAAGACGGTTGAAGGCACCTCTGAACTACAAATGCCTCCTGGCACCCAACCTGGTGATGTCCTTGTTCTTGCAAGAAAAGGTGTTCCAAAACTAAACAAACCATCTATACGCGGTGACCACTTATTTACAGTTAAAGTTACAATACCAAAACGTATTAGCACAAAGGAGCGTGAGTTGCTTGAAGAACTTGCTTCTCTAGGAGATACAAGTGGCCGTTCAAAATCCCGTTCTAGAACCCATTCTTCCACAGTAAGTAGGGAAACTCCTGCAGCTCAAAGGGTCGAAAGTTCAACAGCAGCAGTTGAAGAAAAAACTGAACAATCAGAAGACCAAAATGATTTATGGAATAAATTGAAGGACTTAGCTGGGTCAGTGGCCAATGGTGCCCTTAAGTGGCTGAAAGATAATCTTTAG 1503 0.4478 MAVISFSLVPSLLPPSSSSSSSSCFCGGIPLRSHKSFLSIHSASPFPSLASNSKFFGGGGSSRRFHTVVSASADYYATLGVPKSATGKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFGGGMDPTGFGTRRSTVTKGQDIRYDFSLTFSEAIFGTEKEFDLSHLETCEVCSGTGAKIGSKMKICSTCGGRGQVMRTEQTPFGLFSQVSVCPTCGGDGEIISEYCRNCSGEGRIRVKKNIKVKVPPGVSSGSILRVTGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDDINLRSTISVSYLDAILGSVVKVKTVEGTSELQMPPGTQPGDVLVLARKGVPKLNKPSIRGDHLFTVKVTIPKRISTKERELLEELASLGDTSGRSKSRSRTHSSTVSRETPAAQRVESSTAAVEEKTEQSEDQNDLWNKLKDLAGSVANGALKWLKDNL 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00061 500 Gene3D - 337 429 - -
Aip08g00061 500 PANTHER MOLECULAR CHAPERONE HSP40/DNAJ FAMILY PROTEIN 63 443 - -
Aip08g00061 500 Pfam DnaJ C terminal domain 194 412 IPR002939 -
Aip08g00061 500 PRINTS DnaJ domain signature 76 94 IPR001623 -
Aip08g00061 500 PRINTS DnaJ domain signature 94 109 IPR001623 -
Aip08g00061 500 PRINTS DnaJ domain signature 110 130 IPR001623 -
Aip08g00061 500 PRINTS DnaJ domain signature 130 149 IPR001623 -
Aip08g00061 500 CDD DnaJ 74 127 IPR001623 -
Aip08g00061 500 Gene3D - 221 285 - -
Aip08g00061 500 SUPERFAMILY Chaperone J-domain 70 179 IPR036869 -
Aip08g00061 500 ProSiteProfiles dnaJ domain profile. 74 138 IPR001623 -
Aip08g00061 500 TIGRFAM DnaJ_bact: chaperone protein DnaJ 74 428 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Aip08g00061 500 ProSitePatterns Nt-dnaJ domain signature. 115 134 IPR018253 -
Aip08g00061 500 Pfam DnaJ domain 74 135 IPR001623 -
Aip08g00061 500 CDD DnaJ_zf 221 285 IPR001305 GO:0031072|GO:0051082
Aip08g00061 500 Gene3D - 191 327 - -
Aip08g00061 500 MobiDBLite consensus disorder prediction 462 476 - -
Aip08g00061 500 MobiDBLite consensus disorder prediction 427 476 - -
Aip08g00061 500 Hamap Chaperone protein DnaJ [dnaJ]. 71 484 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Aip08g00061 500 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 208 288 IPR036410 -
Aip08g00061 500 MobiDBLite consensus disorder prediction 431 458 - -
Aip08g00061 500 ProSiteProfiles Zinc finger CR-type profile. 208 290 IPR001305 GO:0031072|GO:0051082
Aip08g00061 500 SMART dnaj_3 73 130 IPR001623 -
Aip08g00061 500 Pfam DnaJ central domain 221 285 IPR001305 GO:0031072|GO:0051082
Aip08g00061 500 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 63 443 - -
Aip08g00061 500 Gene3D DnaJ domain 71 175 IPR036869 -
Aip08g00061 500 CDD DnaJ_C 192 415 - -
Aip08g00061 500 SUPERFAMILY HSP40/DnaJ peptide-binding domain 189 342 IPR008971 GO:0006457|GO:0051082
Aip08g00061 500 SUPERFAMILY HSP40/DnaJ peptide-binding domain 338 423 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00061 Aip-Chr8 369746 375000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00061 75 137 C2H2 Transcription Factor Family AT1G74250 47.826 2.25e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00061 K03686 - gmx:100798567 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00061 08 369746 375000 Aip08g00061 08 369746 375000 ECH