Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00048 ATGGTTGTGAAAGAGGGGAGCAGACCACCCTGGGTGGGTCTTGGCGCCGCTGCTTGGGTCCAAATAGCTGCGGGAAATGCCTACAACTTCCCGCTCTACTCCTCCGCCCTCAAATCCGTCTTGTCCCTCAACCAGCAGCAGCTCACCATCCTGGGCGTGGCCAACGACGTGGGCGAGAACGTGGGCATCCTCCCTGGCATTGCATGCAACTTCCTCCCTCCTTGGTCCCTCCTCCTCATTGGTGCTCTCCTCTGTTTCTTGGGCTATGGAGCTCTCTTCCTTGCTCTCACCGGAACTCTCTCTACCTTCCCCTATGTCCCCTTATGCCTTGCTCTATGTGTTGCCACCAACAGCAATGCATGGTTCGGGACTGCTGTTCTTGTTACCAACATGAGAAACTTCCCTCTCTCCCGAGGCACCATCTCCGGCATCCTCAAGGGCTATGTCGGGATCAGCGCCGCAGTCTACACTCTCATATACACCTTGTTGCTCAAACACTCTGCATCAAATCTTGTGCTCTTTCTCGCACTTGGAGTTCCCATTGCATGCTTGCTCATCATGTACTTCATTCGCCCCTGCACTCCTCCTTCTGGTGAAGACTCTTCTGTCCATTGCCATTTCCTCTTTGTTCAAGCCGCCAGTGTTTTACTTGCCACCTATCTTGTTACAACCACAATACTCTGCGACATCTTTTCTATCACTGGTGCTCTCTCTTATGTCCTAGCTGCTATAATGCTTCTGCTTCTCATGACTCCCCTTGCAATCCCTCTCAAGATGACACTATTCCCTTCCCATCCAAAGGCAAACAATGATGATCTTCATCCTGTTACCTCAAATCAAACCGATCCCTTGCTGGCACCATCTTCCTCGGCTGCCAGTCTTGTTGACGAGGATGCTTCAGATATTGAGACACTTCTTGCAGAGGGTGAGGGAGCTGTGACGGGTAACAAAAGGAGGCCCAAGAGGGGAGAAGACTTCAAGTTCAGAGAAGCCATAGTCAAGGCTGATTTCTGGCTTCTCTGGTTTGTTTACTTTTTTGGGGTTGGTTCAGGAGTAACGGTTCTCAACAATCTCGCTCAGATTGGAGTTGCTTTGGGAGCCAATGACACAACCATACTGCTCTCACTCTTCAGCTTTTGCAACTTTCTGGGTCGTCTTGGTGCCGGTGCTGTTTCTGAACACTTTGTTAGGTCCATAGCTCTGCCTCGAACAATTTGGATGACATGCACACAAATAATAATGATCATAGCATTTTGCCTCTATGCTTCAGCTCTTGACGGCACTCTCTATGCTGCAACGGCCTTGCTTGGGGTATGTTATGGGGTTCAGTACTCTATAATGGTTCCAACTGTGTCTGAGCTCTTTGGTCTCAAGAACTTTGGTATTACAAGTAACTTCATGATGCTAGGGAATCCAATTGGTGCCATTATTTTCTCTGCTTTGCTTGCTGGCACTGTGTATGATGCAGAAGCTGCTAAGCAAGGAAGCTCAACATGCTATGGTGCAAATTGCTTCAGGCTCACTTTTCTTATTCTTGCCGGTGTTGTTGGACTTGGTACCATCTTGAGTATCATTTTGACTCTCAGAATTCGCCCGGTCTATAAAATGCTCTATGCTGAGGGTTCATTTCGTCTCTCTCACACTTCAAGTCACTGA 1656 0.4885 MVVKEGSRPPWVGLGAAAWVQIAAGNAYNFPLYSSALKSVLSLNQQQLTILGVANDVGENVGILPGIACNFLPPWSLLLIGALLCFLGYGALFLALTGTLSTFPYVPLCLALCVATNSNAWFGTAVLVTNMRNFPLSRGTISGILKGYVGISAAVYTLIYTLLLKHSASNLVLFLALGVPIACLLIMYFIRPCTPPSGEDSSVHCHFLFVQAASVLLATYLVTTTILCDIFSITGALSYVLAAIMLLLLMTPLAIPLKMTLFPSHPKANNDDLHPVTSNQTDPLLAPSSSAASLVDEDASDIETLLAEGEGAVTGNKRRPKRGEDFKFREAIVKADFWLLWFVYFFGVGSGVTVLNNLAQIGVALGANDTTILLSLFSFCNFLGRLGAGAVSEHFVRSIALPRTIWMTCTQIIMIIAFCLYASALDGTLYAATALLGVCYGVQYSIMVPTVSELFGLKNFGITSNFMMLGNPIGAIIFSALLAGTVYDAEAAKQGSSTCYGANCFRLTFLILAGVVGLGTILSIILTLRIRPVYKMLYAEGSFRLSHTSSH 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00048 551 SUPERFAMILY MFS general substrate transporter 210 532 IPR036259 -
Aip08g00048 551 Pfam Nodulin-like 10 257 IPR010658 -
Aip08g00048 551 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 551 - -
Aip08g00048 551 Gene3D MFS general substrate transporter like domains 332 535 IPR036259 -
Aip08g00048 551 CDD MFS_Mch1p_like 9 520 - -
Aip08g00048 551 SUPERFAMILY MFS general substrate transporter 10 195 IPR036259 -
Aip08g00048 551 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 2 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00048 Aip-Chr8 299078 300823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00048 4 550 Nodulin-like Gene Family AT1G80530 60.721 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00048 - - adu:107459780 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00048 08 299078 300823 Aip08g00048 08 299078 300823 ECH