Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00036 ATGAGCCTCCTTGTTCTGTTTCTTCATGCTGCTTTTGCTCACACTTCTGCAAATGCACAACCTCCAGGAGTTAAGGTTAGAATGGTGCACCACCAGAATTTGAATAAGAGGATTCAAATATCACTAATTGTTTGTTCTGCGCTTCTCCTTGGAATCTTCCTACTTGTATTGTATGTCTGGTTTCGTCGCCATAGAAGCTTAACAAGCTCCAGCAGTAAAAGCCAAGGAAACATGGAGGCTGAAAAAGGGGAAACCTTAAACCCTGTCAATGCTAAACTTAACTACTCAAGGATGGCAGATAAGAAGAGTTCAGTTGCTATTTTTGACTTTCAATTATTAGAGGCCGCAACAAACAGCTTTAGCAACAGCAATGTTATGGCAGAGAGTGGCTCTAGAATTGTTTACAGAGCTCATCTTGATGAGAATTTCCATGCAGCTGTTAAGAAAGCAGATAGTGATGCTGATAGAGAATTTGAGAATGAAGTGAGTTGGCTGAGCAAGATTCGGCATCAAAATATCATAAAACTCATGGGCTATTGTATTCATGGTGAATCAAGATTTCTTGTTTATGAATTGATGGAGAATGGATCATTGGAAACTCAATTGCATGGGCCTAATCGTGGATCATCTTTAACTTGGTATCTCCGTTTAAGAATTGCAGTTGATGTTGCCAGAGCATTAGAATATCTTCACGAACACTCCAATCCCCCCGTGGTTCATAGAGATATAAAGTCTTCCAATGTTCTTCTCGATTCTAATTTTAATGCTAAGCTCACAGATTTTGGACTTGCTATCTCTTCTGGAGTGCAACACAAGAACATGAAGATGTCGGGAACTTTGGGATATGTGGCACCTGAGTACATATCACATGGTAAACTAACTGATAAGAGCGATGTGTATGCTTTTGGGGTTGTCCTTTTAGAACTTCTGACTGGAAAAAAACCGATGGAAAACATGTCATCAGACCAATATCAATCCCTCGTTTCGTGGGCCATGCCTCAGCTAACCGACAGATTGAAGCTTCCAAGTATTGTGGATCCTGTTATCAGAGACACAATGGATTTGAAACATTTATATCAGGTTGCAGCGGTAGCTGTTCTGTGCGTGCAAGCCGAACCAAGTTATAGGCCGCTAATAACAGATGTGCTACATTCCCTCATTCCTTTGGTACACAACCAACTTAAGGTTGGTGCCTCTCTCACAGATATAGAATTAGTCCGCTCAGAGTGA 1230 0.4098 MSLLVLFLHAAFAHTSANAQPPGVKVRMVHHQNLNKRIQISLIVCSALLLGIFLLVLYVWFRRHRSLTSSSSKSQGNMEAEKGETLNPVNAKLNYSRMADKKSSVAIFDFQLLEAATNSFSNSNVMAESGSRIVYRAHLDENFHAAVKKADSDADREFENEVSWLSKIRHQNIIKLMGYCIHGESRFLVYELMENGSLETQLHGPNRGSSLTWYLRLRIAVDVARALEYLHEHSNPPVVHRDIKSSNVLLDSNFNAKLTDFGLAISSGVQHKNMKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGKKPMENMSSDQYQSLVSWAMPQLTDRLKLPSIVDPVIRDTMDLKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLIPLVHNQLKVGASLTDIELVRSE 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00036 409 Gene3D Transferase(Phosphotransferase) domain 1 193 400 - -
Aip08g00036 409 PANTHER OS01G0253100 PROTEIN 15 393 IPR045271 GO:0004714|GO:0006468
Aip08g00036 409 PANTHER RECEPTOR-LIKE KINASE 15 393 - -
Aip08g00036 409 CDD STKc_IRAK 126 389 - -
Aip08g00036 409 ProSiteProfiles Protein kinase domain profile. 120 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00036 409 SUPERFAMILY Protein kinase-like (PK-like) 97 386 IPR011009 -
Aip08g00036 409 SMART serkin_6 120 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00036 409 Pfam Protein kinase domain 134 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00036 409 Gene3D Phosphorylase Kinase; domain 1 82 192 - -
Aip08g00036 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00036 Aip-Chr8 235229 237833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00036 13 332 Receptor kinase-like Gene Family AT1G80640 48.308 2.97e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Aip08g00036 PK_Tyr_Ser-Thr 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00036 - - gmx:100811491 630.557