Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00028 ATGCCTGCCGGTGGTGTTGGGCAAACCATATGTGTAACCGGCGCCGGAGGTTTCATCGCCTCTTGGATGGTCAAACTCCTCCTTGAAAGAGGTTACTCTGTCAAAGGAACCCTGCGTAACCCAGATGATCCGAAGAATGGACACTTGATGCAGTTGGAAGGAGCGGCGGAGAGGCTCACTCTTCACAAGGTCGATCTCCTTGACCTTGACTCTGTTAGGGTCGTCATTCACGGTTGCCATGGTGTCTTTCACACTGCTTCTCCCGTCACTGACAACCCCGAGGAAATGGTGGAGCCGGCGGTAAATGGAGCCAAGAATGTGATTATAGCAGCTGCGGAAGCTAAAGTGAGACGCGTGGTCTTCACTTCATCAATTGGCGCAGTGTATATGGACCCAGCGAGGAGCATGGACGAGGTGGTGGATGAATCGTGTTGGAGTGATCTAGAGTATTGCAAGAACACCAAGAACTGGTATTGCTATGGAAAGGCAGTGGCAGAAAAAGCAGCATGGGAAGAGGCAAAGGAGAAAGGGGTGGACTTGGTTGTGGTGAACCCAGTGTTGGTTCTTGGACCGTTGCTGCAGCCAACTATAAATGCCAGCACAATTCACATCCTCAAGTACCTCACTGGCTCCGCCAAAACTTATGCCAATGCCACGCAGGCCTATGTCCATGTCAGGGATGTCGCATTAGCTCACATACTTGTCTACGAGACCCCTTCTGCTTCCGGTCGATACCTCTGCCTCGAAAGTTCCCTCCACCGCGGCGACCTCGTTCAAATTCTTGCCAAGCATTTCCCCGACTACCCTGTTCCCACCAAGTGTTCCGACGAAAAGAATCCAAGAGCAAAGCCCTACACCTTCTCTAACCAAAAGCTGAAGGATTTGGGATTAGAATTCACTCCAGTGAGTCAGTGTCTATATGAAACGGTTAAGAGCCTACAGGAGAAGGGCCACCTTCCTATTCCCAATAAGGAACAAGATTCTGTTCAAGTTAAAAAATAA 1002 0.502 MPAGGVGQTICVTGAGGFIASWMVKLLLERGYSVKGTLRNPDDPKNGHLMQLEGAAERLTLHKVDLLDLDSVRVVIHGCHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIGAVYMDPARSMDEVVDESCWSDLEYCKNTKNWYCYGKAVAEKAAWEEAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYETPSASGRYLCLESSLHRGDLVQILAKHFPDYPVPTKCSDEKNPRAKPYTFSNQKLKDLGLEFTPVSQCLYETVKSLQEKGHLPIPNKEQDSVQVKK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00028 333 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 323 - -
Aip08g00028 333 Pfam NAD dependent epimerase/dehydratase family 10 241 IPR001509 -
Aip08g00028 333 Gene3D - 4 333 - -
Aip08g00028 333 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 5 323 - -
Aip08g00028 333 CDD FR_SDR_e 11 297 - -
Aip08g00028 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 314 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00028 Aip-Chr8 200817 203235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00028 7 273 Monolignol Biosynthesis Gene Families AT1G80820 73.034 6.29e-140 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00028 K09753 - gmx:100789070 573.933