Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00024 ATGAGGAAACTAAGATTTAATCTGAAGGGACTGGGGCCGCTTCCTCCGACTGGTGGGAGTGGCGGAATAAGGAGAAACGACAATGCATCAACATCTTTTAGGGTAGGAATGAGAAGGGGGTCGAATGGGCTAAGAGTACTTGGGAGATCCCTGAAAAGTGGAGTGACGTGGGCATCAGTGTTCCCAGAAGATCTTAAAGTGTCTGAGAGAAAAATATTTGACCCTCAAGACAAGACCCTTCTGCAGTGGAATAAATTCTTTCAAGTTTTGTGTATCATATCTGTATCTTTTGATCCCCTTTTCTTTTATCTCCCATATTTCAATCACAAATCATTCTGTCTTGCCATAGACAGCAGCCTGGCAAGCTATGCAGTTACACTCAGAACAATCTTCGATGCTATCTACATCCTTCGCATAAGTTTCCAGTTTCGCACTGCTTTCATTGCGCCTTCTTCTCGTGTCTTTGGACGAGGTGAACTCGTCATAGATCCTGCAGAGATTGCTAAGAGATATTTGCAACGTTACTTCATTGTTGACTTCCTCTCTGTGTTGCCTTTGCCACAGATTGTCGTGTGGAGATATCTTCATGATCCAGCGCGCACAAAGGTATTAGCCACAAAAACGCAACTGTTGAACATTGTCATCCTCCAATATTTTCCAAGATTTCTACGCTTTCTACCTTTGGCCTCAGAGATTAGCAAGACAGCAGGTGTTTTTTCGGAGAATACTTTGGTCGGCGCCGCATATTACTTGACCTGGTACATGCTTGGCAGCCACATAACTGGGTCTGTATGGTACTTATTAGCTGTAGAACGTAATGACACGTGCTGGAGGAATGCTTGCATGGAGGAAGAGCGATGTTTCACGCATTTCTTGTACTGTGGGGGTTCAAATAAGCGTGCTACTGGCTATGAAGAATGGAGAAGGATTAGCCCAACGATTCTTAAGAATAAGTGTTCCGCTGATGATGACGACGCCCCATTTGACTATGGAATTTTCAATCAAGCCATAACATCTAATATTGTTGCATCGATCAATTTCTTTCCTAAACTATGTTACTGTTTATGGTGGGGTGTCCAAAACATAAGCACACTTGGTCAAGGGCTTCAAGCTAGCACCTACGTTGGAGAAATTCTGTTTTGCATTTTATTAGCTGTTTTGGGGCTTGTCCTTTTTGCTGTTTTGATTGGAAAGATGCAGAACTTTCTTCAATCGATGTCTGTCCGTCTAGAGGAAATGAGGATCAGAAGACGTGACTCAGAGCAATGGATGCACCACCGCTTGCTTCCAGCGGAGCTAAGGGAAAAAGTTAGACGCTATGATAAATGTAAATGGTTTAACACACGTGGAGTAGATGAAGAGAGCTTGGTTCAGAAACTTCCCAAAGATCTGAGGAGAGACATCAAACGATACCTTTGTTTGAATTTGGTCAGAAGGGTTCCTCTGTTTGCCAACATGGATGAGCGGTTGCTGGATGCGATATGCGAGCGGCTGAAGCCGTGTCTGCATACAAAGGGGACGTGCATAATAAGGGAAGGGGATCCGGTGAATGAGATGCTGTTCATCGTACGTGGGCAACTTGAGAGCGTGACGACGGACGGCGGAAGAAGTGGATTCTTCAACAGAGGTTTTTTGAAAGACGGTGACTTCTGTGGAGAAGAGCTGTTAACATGGGCACTGGACCCAAAATCATCGTCGAATTTACCGTCATCTACAAGGACTGTGAAGGCCATGAATGAAATGGAGGCATTCGCTCTGGAGGCAGAGGAGCTCAAGTTTGTTGCTTCCCAGTTCAGGCGCCTTCACAGCAGGCAGGTTCAGCACACCTTCCGTTTCTACTCCCAGCAGTGGCGGACTTGGGCTGCCATCTTCATCCAGGCTGCCTGGAGGCGCCACCAGAGGAGGAAAATTGCATCCATGCACCACATCAAGCCTGATGATGATGACGATGATGATCAACCCCATCATGATGATGACGACGACGACGATGATACAAAGGCCTTGATTCCATCTTCTTCGTCTTCATCTTCTATTGCTAATACTACTACTACTGCTGCTGCTACTTCTACTATGCTTATTGGGTTAGATTCGGCTATGTATGCTTCCCGGTTTGCAACTAATCTGCGTGGGCAGAGGCCCCGTTCTTCCAGTTCGGAGGGCATCGGCCTTCCCCCCCAAAAGCCTCGAGAACCCGACTTCAGCCATCTTGATGATGATGATGACCCACGCTAA 2232 0.461 MRKLRFNLKGLGPLPPTGGSGGIRRNDNASTSFRVGMRRGSNGLRVLGRSLKSGVTWASVFPEDLKVSERKIFDPQDKTLLQWNKFFQVLCIISVSFDPLFFYLPYFNHKSFCLAIDSSLASYAVTLRTIFDAIYILRISFQFRTAFIAPSSRVFGRGELVIDPAEIAKRYLQRYFIVDFLSVLPLPQIVVWRYLHDPARTKVLATKTQLLNIVILQYFPRFLRFLPLASEISKTAGVFSENTLVGAAYYLTWYMLGSHITGSVWYLLAVERNDTCWRNACMEEERCFTHFLYCGGSNKRATGYEEWRRISPTILKNKCSADDDDAPFDYGIFNQAITSNIVASINFFPKLCYCLWWGVQNISTLGQGLQASTYVGEILFCILLAVLGLVLFAVLIGKMQNFLQSMSVRLEEMRIRRRDSEQWMHHRLLPAELREKVRRYDKCKWFNTRGVDEESLVQKLPKDLRRDIKRYLCLNLVRRVPLFANMDERLLDAICERLKPCLHTKGTCIIREGDPVNEMLFIVRGQLESVTTDGGRSGFFNRGFLKDGDFCGEELLTWALDPKSSSNLPSSTRTVKAMNEMEAFALEAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAAIFIQAAWRRHQRRKIASMHHIKPDDDDDDDQPHHDDDDDDDDTKALIPSSSSSSSIANTTTTAAATSTMLIGLDSAMYASRFATNLRGQRPRSSSSEGIGLPPQKPREPDFSHLDDDDDPR 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00024 743 MobiDBLite consensus disorder prediction 708 722 - -
Aip08g00024 743 MobiDBLite consensus disorder prediction 9 28 - -
Aip08g00024 743 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 25 736 - -
Aip08g00024 743 Gene3D Jelly Rolls 480 600 IPR014710 -
Aip08g00024 743 ProSiteProfiles cAMP/cGMP binding motif profile. 482 566 IPR000595 -
Aip08g00024 743 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 25 736 - -
Aip08g00024 743 MobiDBLite consensus disorder prediction 706 743 - -
Aip08g00024 743 Pfam Cyclic nucleotide-binding domain 505 592 IPR000595 -
Aip08g00024 743 Gene3D - 84 404 - -
Aip08g00024 743 SMART cnmp_10 482 613 IPR000595 -
Aip08g00024 743 CDD CAP_ED 482 613 IPR000595 -
Aip08g00024 743 SUPERFAMILY Voltage-gated potassium channels 75 404 - -
Aip08g00024 743 MobiDBLite consensus disorder prediction 651 665 - -
Aip08g00024 743 Pfam Ion transport protein 83 409 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aip08g00024 743 SUPERFAMILY cAMP-binding domain-like 412 602 IPR018490 -
Aip08g00024 743 Gene3D Helix hairpin bin 405 473 - -
Aip08g00024 743 MobiDBLite consensus disorder prediction 641 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00024 Aip-Chr8 180518 183267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00024 6 733 Ion Channels AT1G15990 62.892 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00024 K05391 - gmx:100810453 1009.59