Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00022 ATGCACCAACACTCTATCTATGATCTTGTTGAGGGAGTTTCCAATATTAACATATTGGCTGCAAGGGCCCAAAATGCTACTACCAATGTCTTAAAAGAAGGGCGTCGCAATGCTACAGTTCAAGTTGAGGAAGGAAAAGATCAGAATGTGGTAGATAAGATGTTGGGAGGCAAACAACAAATCGGCTCAGAAGAACAAGCTCAGACTCCAACAAACGCAGATATTGGTAAAGCTGGTTCAAAGAATCATTCGTTTGAAGATGAGAAGAATGATTCAACCCTATCTACAGTTGGCTTGTCTAGTGTCAGACTCCTTGATGGACTTCTAGTTTCCACATTTGATGAAGGATCATGCATTAGTAGGTATCAATCTTACTTGTTTCGCAAACGTTCCCCTCACAAACCTTCTGTATATCTGATATCCAAGCTACGAAAGTATGAACATCTTCATAGAAGTTGTGGACCACATACCAAATCCTATGACAAAATTATGGGAAAGAGCACAAAATCTAGCAAAAGCGGTGCAGGTGAGAAGTGCAAATACCTTGTCTGGACAGCTTCCAATGGCCTAGGGAACAGGATGCTAACCCTGGTTGCAGCATTTCTTTATGCTATCCTCACAGACCGTGTTCTACTAGTCAAATTTGGGGATGATATGTCTGATCTCTTTTGTGAGCCATTTGCTGATTCCTCATGGTTATTGCCCAGGAATTTTCGTTATTGGAAGGATCAGAAACATATCAAAACGCATGAAAGCATGCTAATCAATAAGGGATACAATGCAAAGGAGCTTTTTCCATCATTTCTTATTCTTAATCTACAACACACCCATGACGGTCATAATAACTTTTTCCATTGTGATCATTGTCAAAATCTTCTTCAGAGAGTTCCCGTGATGATTTTATGGTCAGATCAATATTTTGTCCCTTCTCTTTTTCTGATTCCATCCTTTAGAAAAGACTTGAGCAAAATGTTCCCCCAGAAAGACACAATTTTTCACCATCTAGGACGTTACCTTTTCCACCCATCAAACAAGGCATGGGAATTAATCAGCAAGTTCTATCAGGCGCACTTAGCCAAGGCAAATGAGAAGATTGGCCTGCAGATTAGGGTATTCAATACTCATAGAGCATCACATCAAACTATTATCAATGAAATTATAGCCTGCGTCCTCAGGCACAAGCTTCTTCCTGAAATAGACATGGAAAAGTCGACAACTTCTTTGAAGAACCGTGCCACAATCTCAAAAGCTGTTCTAGTAGCATCATTATACTCTGAATATGGGGAGAGGCTGAGAAATATTCCCAAGTCCACTTTTGGGTATGTTGCTCATGGTCTTGGAGGTTTGAAGCCGTGGATTCTGAAGAGGCCATATGGGGAAACAGTCCCAGAGCCTCCTTGTCAACGAGCCATGTCCATGGAGCCTTGTTTCCATTATCCTCCCAAGTATGAATGTAGTGCCAATAGAACTATTGACTTCACTTCCCTCGTTCATCACGTGGAGCATTGTGAAGATGTACCTAACGGATTAAGGCTGATCAATGATAATCGCAAAGGTTAG 1560 0.4109 MHQHSIYDLVEGVSNINILAARAQNATTNVLKEGRRNATVQVEEGKDQNVVDKMLGGKQQIGSEEQAQTPTNADIGKAGSKNHSFEDEKNDSTLSTVGLSSVRLLDGLLVSTFDEGSCISRYQSYLFRKRSPHKPSVYLISKLRKYEHLHRSCGPHTKSYDKIMGKSTKSSKSGAGEKCKYLVWTASNGLGNRMLTLVAAFLYAILTDRVLLVKFGDDMSDLFCEPFADSSWLLPRNFRYWKDQKHIKTHESMLINKGYNAKELFPSFLILNLQHTHDGHNNFFHCDHCQNLLQRVPVMILWSDQYFVPSLFLIPSFRKDLSKMFPQKDTIFHHLGRYLFHPSNKAWELISKFYQAHLAKANEKIGLQIRVFNTHRASHQTIINEIIACVLRHKLLPEIDMEKSTTSLKNRATISKAVLVASLYSEYGERLRNIPKSTFGYVAHGLGGLKPWILKRPYGETVPEPPCQRAMSMEPCFHYPPKYECSANRTIDFTSLVHHVEHCEDVPNGLRLINDNRKG 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00022 519 MobiDBLite consensus disorder prediction 60 91 - -
Aip08g00022 519 Pfam Xyloglucan fucosyltransferase 97 434 IPR004938 GO:0008107|GO:0016020|GO:0042546
Aip08g00022 519 Pfam Xyloglucan fucosyltransferase 436 485 IPR004938 GO:0008107|GO:0016020|GO:0042546
Aip08g00022 519 PANTHER FUCOSYLTRANSFERASE 2-RELATED 76 434 IPR004938 GO:0008107|GO:0016020|GO:0042546
Aip08g00022 519 PANTHER FUCOSYLTRANSFERASE 2-RELATED 435 516 IPR004938 GO:0008107|GO:0016020|GO:0042546
Aip08g00022 519 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 76 434 - -
Aip08g00022 519 MobiDBLite consensus disorder prediction 61 78 - -
Aip08g00022 519 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 435 516 - -
Aip08g00022 519 Gene3D - 177 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00022 Aip-Chr8 175589 177797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00022 99 513 Xyloglucan Fucosyltransferase1 AT2G03220 45.745 2.17e-139 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00022 K13681 - gmx:100799776 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00022 08 175589 177797 Aip09g00134 09 1078503 1082211 PCT