Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00021 ATGCCTTCAAGAGCGTTGCCAGCAAGTGTTAGCAGGGCAAAGAGCAAGGGCGTGTTCCTTGCACTGTCCATTTCAGCTTGTGCTGTGATCCTGTGCTCTGTGCTTTACTTCCTTTACCATTTGTGGCAGTCTGTGGTGCACAGAGGAGCAAAAACCATCCCGTTCGACGCAAGTGCTCCGTTGAAGCTGCAGAGGTTCTCCTACAAAGACCTGAAGCAAGCGAGCAACGGCTTTGACAGGTGCAACGTGATAGGGAAGGGTGGGTCGGGCACTGTGTTCAGGGGAATACTGAGGGACGGGAAACTGATTGCCATAAAGCGGTTGGACTCCATGACGGTGCAGGCAGAGAGAGAGTTCCAGAATGAGGTGCAGGTTCTGGGAGGGCTGAGGTCACCCTTCTTGGTGACCCTGCTGGGCTACTGTGTGGAAAGGAACAAGAGGGTGTTGGTGTATGAGTACATGCCCAACAGAAGCCTCCAGGAGTCCCTCTTTGGAGATGCAGATGCAGATGTCACCTTGACTTGGGACAGAAGGTTCTCCATTATCCTCGATGTTGCCAGGGCTCTCGAGTTCTTGCACCTTGGATGTGATCCGCCCGTCATACACGGCGATGTCAAGCCTAGCAATGTCCTGCTCGACGCAGACTGCCGTGCCAAGATCTCCGACTTCGGCCTCTCCAGGATTAAGCTCGACCCTCCTGATCTTGCTGTCGACTTGTTCAGCCAGGATCTTTCAGGTAACTTAACTGCCGACACTCATACTCCCACTCACACTCACACTCAGAGTGTTGATGAAGTTGATTTCGCTATGGCCTTGCAAGCCTCCTCTTCCTCCAAGAATAGCATTAGCAGGCCCTGCTTCAATGTTAGACCTCTCAACTTGAATTCTTTTAATTACAATCCCAATCTTGCTGCCGCCGAAGCTGAAATCACCACTGTAAATACTAAAGGCAAGGAAAGCTCTACTTTTGATTTGGGAGGGGATGATTGGAGTGGCAAGTTTGTTCCTTATGATGATGAGTTTTCTAGCCTTGATCATAGCAAGGACCTAACTGGAGTTCATGCTTCTTTCGCGGACGATGACAAGGCAAATGGGAAGCAATGGGGAAAGGACTGGTGGTGGAAACAGGATGGAAGCGGTGAATTATGCAGCAGAGACTATGTCACGGAATGGATAGGGAGTCAGATCGGCCCATCCAACGCAGATTGGGTCGATGCAAAGAGTAACGTTGCCGACAAAGCTGAGTTGGAAAGATCAGGTCCAATGGATGAAGCCAGTGATGCAAACGGACCCCAGCTACAGCAGGTCTTTGGTATGGAAAGCACCGTTGAGAGAAAGAAGAAGAACCCGCGGAAGATGCGAGAGTGGTGGAAAGAAGAGCACATTGCTGAATTGAGCAAGAGCAGCAGCAAGCTCAAGAGTCTTCAAGCCAGGTGGAAGAAAGGCTTAAAAGTGCCCCATTTTGATCTGGGCAGAAGATTTTACCTTTGCAAACGAAAGAACTTGGGAGAGGAGGGTGGTCAGAATGAGTATGATCAAAATGGGGAGTTCAGCTTCAGAAGAGGATGGAAGAAGAAGAGCACTCATTCCGTTGGAAGTGACATGTGGAGTGGGGATCTTTTCAGCCGCGAGCTCAGCAGCACAACCAGCATGAGAGGGACACTGTGCTACGTGGCTCCAGAGTATGGCGGCTGCGGCTTCTTAATGGAGAAGGCCGATATATATAGTTTTGGGGTTTTGATTCTTGTGATTGTGTCGGGAAGAAGGCCGCTACATGTTCTGGCATCTCCCATGAAGCTTGAGAAAGCTAATTTGATCAGCTGGTGTAGGCATCTTGCTCAAGCGGGTAACATTTTAGAACTAGTGGACGAGAAATTGAAGGAACATTACAACAAGGACCAAGCAAGCCTTTGTATCAACTTGGCGCTTGCTTGCTTGCAAAGAATTCCAGAGTTGCGCCCTGATATTGGGGACGTTGTTAAAATTTTGAAAGGGGAGATGGATCTTCCGCCACTTCCATTTGAGTTCTCCCCTTCACCACCTTCCAGATTATATAGCAGATCAAGGAGAAAACAGAAGGGCACTGTCGAATAG 2094 0.4947 MPSRALPASVSRAKSKGVFLALSISACAVILCSVLYFLYHLWQSVVHRGAKTIPFDASAPLKLQRFSYKDLKQASNGFDRCNVIGKGGSGTVFRGILRDGKLIAIKRLDSMTVQAEREFQNEVQVLGGLRSPFLVTLLGYCVERNKRVLVYEYMPNRSLQESLFGDADADVTLTWDRRFSIILDVARALEFLHLGCDPPVIHGDVKPSNVLLDADCRAKISDFGLSRIKLDPPDLAVDLFSQDLSGNLTADTHTPTHTHTQSVDEVDFAMALQASSSSKNSISRPCFNVRPLNLNSFNYNPNLAAAEAEITTVNTKGKESSTFDLGGDDWSGKFVPYDDEFSSLDHSKDLTGVHASFADDDKANGKQWGKDWWWKQDGSGELCSRDYVTEWIGSQIGPSNADWVDAKSNVADKAELERSGPMDEASDANGPQLQQVFGMESTVERKKKNPRKMREWWKEEHIAELSKSSSKLKSLQARWKKGLKVPHFDLGRRFYLCKRKNLGEEGGQNEYDQNGEFSFRRGWKKKSTHSVGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQAGNILELVDEKLKEHYNKDQASLCINLALACLQRIPELRPDIGDVVKILKGEMDLPPLPFEFSPSPPSRLYSRSRRKQKGTVE 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00021 697 PANTHER OS07G0586332 PROTEIN 1 694 IPR044576 -
Aip08g00021 697 Gene3D Phosphorylase Kinase; domain 1 46 153 - -
Aip08g00021 697 MobiDBLite consensus disorder prediction 673 697 - -
Aip08g00021 697 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Aip08g00021 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Aip08g00021 697 Gene3D Transferase(Phosphotransferase) domain 1 523 669 - -
Aip08g00021 697 SUPERFAMILY Protein kinase-like (PK-like) 59 683 IPR011009 -
Aip08g00021 697 Gene3D Transferase(Phosphotransferase) domain 1 154 275 - -
Aip08g00021 697 Coils Coil 458 478 - -
Aip08g00021 697 PANTHER OS08G0275200 PROTEIN 1 694 - -
Aip08g00021 697 Pfam Protein kinase domain 81 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00021 697 SMART serkin_6 78 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00021 697 ProSiteProfiles Protein kinase domain profile. 78 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00021 697 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00021 Aip-Chr8 166278 168910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00021 531 663 Receptor kinase-like Gene Family AT3G58690 32.836 2.85e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Aip08g00021 Pkinase 1.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00021 - - gmx:100800845 1012.68