Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00017 ATGGCTACCGCTACTGAGAAAGCCATTGGCATCGATCTAGGCACCACTTACAGCTGCGTGGCCGTGTGGCAAAACGACCGCGTAGAGATCATCGCCAACGACCAAGGCAACCGAACCACTCCTTCGTACGTTGCCTTCACGGACACCGAGCGCCTCATCGGAGATGCTGCCAAGAACCAGGTGGCAATGAACCCACAGAACACGGTGTTCGACGCCAAGCGCCTCATCGGTCGTAGATTCTCCGACCCTTCCGTCCAGAGCGACATGAGGCACTGGCCCTTCAAGGTGGTCTCCGGCCCCCAAGACAAGCCCATGATCGTCGTCAACTACAAAGGCGAGCAGAAGCAGTTCGCACCCGAGGAGATTTCCTCCATGGTGCTCACCAAGATGAAGGAGATCGCCGAGGCCTACCTGGGAAAAACCATCAAGAACGCCGTCGTTACCGTCCCCGCCTACTTCAACGACTCTCAGAGGCAGGCCACCAAGGACGCCGGCGCCATTGCAGGCCTCAACGTCATGAGAATTATCAACGAGCCAACCGCCGCTGCTATTGCCTACGGCTTAGACAAGAAGGCCTCCAAAACTGGCGAGAAGAACGTCCTCATCTTCGACCTCGGGGGTGGCACCTTTGACGTGTCTCTCCTGACTATCGAGGAGGGCATCTTTGAGGTGAAGGCCACTGCCGGAGACACCCACTTGGGGGGCGAGGATTTCGACAACAGGCTGGTGAATCACTTCGCGGCGGAGTTCAAGAGGAAGCACAAGAAGGACATGAGCAGCAACGCGAGAGCGCTACGGAGACTGAGGACAGCGTGTGAGAGGGCCAAGAGGACACTCTCCTCCACCGCACAGACGACCATCGAGATCGACTCGCTCTTTGAAGGTATTGATTTCTACGCGACCATCACTCGGGCCAGGTTCGAGGAACTCAACATGGACCTGTTCAGGAAGTGCATGGAGCCGGTTGAGAAGTGTCTCCGCGATGCCAAGGTTGATAAGGCTCAGATTCACGACATTGTCCTTGTTGGCGGCTCCACCAGAATCCCCAAGGTCCAGCAGCTTCTGCAGGACTTCTTCAATGGCAAGGAGCTCTGCAAGAGCATCAACCCCGACGAGGCCGTGGCTTACGGGGCTGCTGTTCAAGCTGCCATCCTGAGCGGCGAAGGCGACCAGAAAGTCCAAGACTTGCTTCTTCTCGACGTCACGCCCCTCAGCCTGGGCATTGAAACCGCCGGTGGGGTGATGACGGTCTTGATTCCCAGGAATACCACCATACCCACCAAGAAAGAGCAGGTGTTTTCCACCTACTCGGACAACCAGACCAGCGTGCTGATTCAGGTGTACGAGGGTGAGAGGGCAAGAACCAAGGACAACAACCTTTTGGGAACATTTGAGCTCAAGGGGATTCCGCCGGCGCCGAGAGGGGTGCCTCAGATCAACGTGTGCTTCGACATCGATGCCAACGGTATCTTGAACGTGTCTGCGGAGGACAAGACGGCGGGGGTGAAGAACAAGATCACCATCAGCAACGACAAAGGAAGGCTGAGCAAAGAGGAGATTGAAAGAATGGTGCAGGAGGCAGAGAAGTACAAAGCAGAGGATGAACAGGTCAAGAAGAAAGTGGACGCCAAGAACTCACTGGAGAATTATGCTTACAGCATGAGGAACACCATCAAGGATGACAATGTTGGTGCCAAACTTGATCCTTCTGACAAGCAGAGGATCGAGAAGGCCATTGATGACACCATCCAATGGTTGGACGGGAACCAGTTGGCGGAAGTAGATGAGTTTGAGGACAAGCTCAAGGAGCTTGAGGCTTTATGCAACCCTGTCATTTCCAAGATGTATCAAGGTGGTGGTACTGCTGCTCCATCCTCTGCCGATGCTGCCCATGACAACTCCGCTGGTGGACCTAAGATTGAAGAGGTTGATTGA 1935 0.5514 MATATEKAIGIDLGTTYSCVAVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPQDKPMIVVNYKGEQKQFAPEEISSMVLTKMKEIAEAYLGKTIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASKTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFAAEFKRKHKKDMSSNARALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDAKVDKAQIHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDQKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITISNDKGRLSKEEIERMVQEAEKYKAEDEQVKKKVDAKNSLENYAYSMRNTIKDDNVGAKLDPSDKQRIEKAIDDTIQWLDGNQLAEVDEFEDKLKELEALCNPVISKMYQGGGTAAPSSADAAHDNSAGGPKIEEVD 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00017 644 CDD HSPA1-2_6-8-like_NBD 8 386 - -
Aip08g00017 644 ProSitePatterns Heat shock hsp70 proteins family signature 3. 339 353 IPR018181 -
Aip08g00017 644 Coils Coil 517 540 - -
Aip08g00017 644 MobiDBLite consensus disorder prediction 617 644 - -
Aip08g00017 644 Pfam Hsp70 protein 8 617 IPR013126 GO:0005524|GO:0140662
Aip08g00017 644 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 5 626 - -
Aip08g00017 644 Gene3D - 70 125 - -
Aip08g00017 644 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 542 622 IPR029048 -
Aip08g00017 644 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Aip08g00017 644 Gene3D Actin; Chain A, domain 4 234 317 - -
Aip08g00017 644 Gene3D - 9 383 - -
Aip08g00017 644 PANTHER HEAT SHOCK PROTEIN 70KDA 5 626 IPR013126 GO:0005524|GO:0140662
Aip08g00017 644 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Aip08g00017 644 PRINTS 70kDa heat shock protein signature 7 20 - -
Aip08g00017 644 PRINTS 70kDa heat shock protein signature 35 47 - -
Aip08g00017 644 PRINTS 70kDa heat shock protein signature 57 65 - -
Aip08g00017 644 PRINTS 70kDa heat shock protein signature 145 165 - -
Aip08g00017 644 PRINTS 70kDa heat shock protein signature 208 218 - -
Aip08g00017 644 PRINTS 70kDa heat shock protein signature 336 352 - -
Aip08g00017 644 PRINTS 70kDa heat shock protein signature 368 388 - -
Aip08g00017 644 PRINTS 70kDa heat shock protein signature 395 414 - -
Aip08g00017 644 PRINTS 70kDa heat shock protein signature 476 492 - -
Aip08g00017 644 SUPERFAMILY Actin-like ATPase domain 195 387 IPR043129 -
Aip08g00017 644 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 548 IPR029047 -
Aip08g00017 644 Gene3D - 191 365 - -
Aip08g00017 644 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 390 543 IPR029047 -
Aip08g00017 644 SUPERFAMILY Actin-like ATPase domain 7 190 IPR043129 -
Aip08g00017 644 Gene3D - 544 618 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00017 Aip-Chr8 158565 160744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00017 1 644 Calmodulin-binding Proteins AT1G16030 85.913 0.0 1173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00017 K03283 - zju:107405906 1131.32