Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00016 ATGGCTACCGCTACTGAGAAAGCCATTGGCATCGATCTAGGCACCACTTACAGCTGCGTGGCCGTGTGGCAAAACGACCGCGTAGAGATCATCGCCAACGACCAAGGCAACCGAACCACTCCTTCGTACGTTGCCTTCACGGACACCGAGCGCCTCATCGGAGATGCTGCCAAGAACCAGGTGGCAATGAACCCACAGAACACGGTGTTCGACGCCAAGCGCCTCATCGGTCGTAGATTCTCCGACCCTTCCGTCCAGAGCGACATGAGGCACTGGCCCTTCAAGGTGGTCTCCGGCCCCCAAGACAAGCCCATGATCGTCGTCAACTACAAAGGCGAGCAGAAGCAGTTCGCACCCGAGGAGATTTCCTCCATGGTGCTCACCAAGATGAAGGAGATCGCCGAGGCCTACCTGGGAAAAACCATCAAGAACGCCGTCGTTACCGTCCCCGCCTACTTCAACGACTCTCAGAGGCAGGCCACCAAGGACGCCGGCGCCATTGCAGGCCTCAACGTCATGAGAATTATCAACGAGCCAACCGCCGCTGCTATTGCCTACGGCTTAGACAAGAAGGCCTCCAAAACTGGCGAGAAGAACGTCCTCATCTTCGACCTCGGGGGTGGCACCTTTGACGTGTCTCTCCTGACTATCGAGGAGGGCATCTTTGAGGTGAAGGCCACTGCCGGAGACACCCACTTGGGGGGCGAGGATTTCGACAACAGGCTGGTGAATCACTTCGCGGCGGAGTTCAAGAGGAAGCACAAGAAGGACATGAGCAGCAACGCGAGAGCGCTACGGAGACTGAGGACAGCGTGTGAGAGGGCCAAGAGGACACTCTCCTCCACCGCACAGACGACCATCGAGATCGACTCGCTCTTTGAAGGTATTGATTTCTACGCGACCATCACTCGGGCCAGGTTCGAGGAACTCAACATGGACCTGTTCAGGAAGTGCATGGAGCCGGTTGAGAAGTGTCTCCGCGATGCCAAGGTTGATAAGGCTCAGATTCACGACATTGTCCTTGTTGGCGGCTCCACCAGAATCCCCAAGGTCCAGCAGCTTCTGCAGGACTTCTTCAATGGCAAGGAGCTCTGCAAGAGCATCAACCCCGACGAGGCCGTGGCTTACGGGGCTGCTCTAAACAATAAAAATATTTAA 1158 0.5639 MATATEKAIGIDLGTTYSCVAVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPQDKPMIVVNYKGEQKQFAPEEISSMVLTKMKEIAEAYLGKTIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASKTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFAAEFKRKHKKDMSSNARALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDAKVDKAQIHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAALNNKNI 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00016 385 ProSitePatterns Heat shock hsp70 proteins family signature 3. 339 353 IPR018181 -
Aip08g00016 385 Gene3D - 70 125 - -
Aip08g00016 385 CDD HSPA1-2_6-8-like_NBD 8 379 - -
Aip08g00016 385 Gene3D - 9 380 - -
Aip08g00016 385 PANTHER HEAT SHOCK PROTEIN 70KDA 5 381 IPR013126 GO:0005524|GO:0140662
Aip08g00016 385 Gene3D - 191 365 - -
Aip08g00016 385 PRINTS 70kDa heat shock protein signature 7 20 - -
Aip08g00016 385 PRINTS 70kDa heat shock protein signature 35 47 - -
Aip08g00016 385 PRINTS 70kDa heat shock protein signature 57 65 - -
Aip08g00016 385 PRINTS 70kDa heat shock protein signature 145 165 - -
Aip08g00016 385 PRINTS 70kDa heat shock protein signature 208 218 - -
Aip08g00016 385 PRINTS 70kDa heat shock protein signature 336 352 - -
Aip08g00016 385 PRINTS 70kDa heat shock protein signature 368 385 - -
Aip08g00016 385 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Aip08g00016 385 Pfam Hsp70 protein 8 381 IPR013126 GO:0005524|GO:0140662
Aip08g00016 385 Gene3D Actin; Chain A, domain 4 234 317 - -
Aip08g00016 385 SUPERFAMILY Actin-like ATPase domain 7 190 IPR043129 -
Aip08g00016 385 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Aip08g00016 385 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 5 381 - -
Aip08g00016 385 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00016 Aip-Chr8 154772 155929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00016 1 380 Calmodulin-binding Proteins AT1G16030 88.421 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00016 K03283 - cit:102625591 710.679