Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00014 ATGGACACTCTGGCCCTTATTCAGGCACAGCCCTTTGCCGCCTCCCTTGCGGTCGCTGCTGTCTCGCTTTTCCTTTTTCTTTACCTATTAAACGGTAGCCGCACTCCCGCAGCTGCCTCACTTGTGGTTGGTCTTGCTACTTCTCTTCCTAAAGTAACAGTGGTTCCGGGTTTACCGATTGTTGGTAATCTGCTGCAATTGAAGGATAAGAAGCCGTACAAGACATTCGTACAGTTTGCCCAAAAATATGGTCCTATATATTCCATCAGGACCGGTGCTTCCACCATTATCGTTCTCAACTCTGCCCATCTTGCTAAGGAGGCCATGATTACCAGATATTCATCGATTTCATCAAGGAAGCTGTCGAATGCATTAACAATTCTGACTTCCAATAAATGTATGGTTGCTATAAGTGACTACAACGACTTTCACAAAATGGTCAAAAAACTTATTCTTGCAAATGTTCTCGGACCCAATGCACAGAAGCGGCATCGTCTCCACAGAGAAGAAATGGTTGAAAACATGTCTAGGCAGTTTAATGAACATGTGAAGAACTCCTCTGATTCCCCGATTAATTTTAGGGATATATTTTCTTCTCAACTTTTTGGATTGGCAATGAAGCAAGGTGTAGGAAGTGATGTGGAATCCATTTATGTGGATGATTTTGGAAATAAAATATCAAGGAAAGACATGTATCAAATTCTAGTGGTTGATATAATGGAGGGTGCAATTGAGGTTGATTGGCGAGATTTCTTCCCATACTTGAGATGGATTCCAAATAGGAGCATGGAGACAAAAATTCAGAGAATGTGCTTCCGCAGGAAAGCAGTTATGAAAGCATTGATCAATGAGCAGAAGAAGAGAATTGCTTCCGGAAAGAAAGTGAATTGTTACATTGACTACCTGTTATCGGAAGCCAAGGAGCTAACCGAAGACCAAATTATGATGCTTCTTTGGGAGACCATCATAGAGACTTCGGATACTACATTAGTTACGTCCGAATGGGCTATGTATGAACTTGCTAAAGACAAAACACGTCAGGATCGATTATATTCGGAGCTCCGAGATGCATGCGGGAATGAGAGGGTAACAGAAGACCATTTGGCTAAGCTGCCGTATTTAGGGGCTGTATTCCATGAAACTCTGAGGAAGCACAGTCCAGCTCCCATTGTCCCACTAAGGCATGTCGATGAAGATACCCAAATAGGAGGATATCACATTCCCGCTGGGAGCGAGATTGCTATAAACATATACGGGTGTAACATGGACGAGGAACTGTGGGAAAATCCTGAGCAGTGGATGCCGGAGAGGTTTCTGGATGATGAGAAGTATGAGACCATGGATCTGTACAAGACAATGGCATTTGGGGCGGGGAAGAGGGTGTGCGCAGGGGCTTTGCAGGCGAATCTGATAGCGTGCTCGTCAATTGGGAGACTGGTTCAGGAATTCGAATGGGAGCTGGCTCAAGGCGAGGAGGAGAATGTTGACACAGTCGGCCTTACCACCCACAGGTTGCATCCCCTCCTTGTCAAAATCAAGCCAAGAAGCAAATGA 1554 0.4466 MDTLALIQAQPFAASLAVAAVSLFLFLYLLNGSRTPAAASLVVGLATSLPKVTVVPGLPIVGNLLQLKDKKPYKTFVQFAQKYGPIYSIRTGASTIIVLNSAHLAKEAMITRYSSISSRKLSNALTILTSNKCMVAISDYNDFHKMVKKLILANVLGPNAQKRHRLHREEMVENMSRQFNEHVKNSSDSPINFRDIFSSQLFGLAMKQGVGSDVESIYVDDFGNKISRKDMYQILVVDIMEGAIEVDWRDFFPYLRWIPNRSMETKIQRMCFRRKAVMKALINEQKKRIASGKKVNCYIDYLLSEAKELTEDQIMMLLWETIIETSDTTLVTSEWAMYELAKDKTRQDRLYSELRDACGNERVTEDHLAKLPYLGAVFHETLRKHSPAPIVPLRHVDEDTQIGGYHIPAGSEIAINIYGCNMDEELWENPEQWMPERFLDDEKYETMDLYKTMAFGAGKRVCAGALQANLIACSSIGRLVQEFEWELAQGEEENVDTVGLTTHRLHPLLVKIKPRSK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00014 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Aip08g00014 517 SUPERFAMILY Cytochrome P450 56 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00014 517 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 7 516 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Aip08g00014 517 Gene3D Cytochrome P450 48 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00014 517 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00014 517 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00014 517 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00014 517 Pfam Cytochrome P450 56 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00014 517 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00014 517 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00014 517 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00014 517 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00014 517 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00014 517 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip08g00014 517 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00014 Aip-Chr8 137429 140746 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00014 47 515 Cytochrome P450 AT5G25900 62.473 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00014 K04122 - gmx:100802970 757.288