Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00009 ATGACTGGTGAAAGCAAAATTGTTCAGAAGGATCACAAGGCACCATTTTTGATGTCCGGTTGCAAAGTAGCAGATGGAGTTGGTACTATGCTGGTAACAGGTGTTGGCATTAACACTGAATGGGGACTGTTGATGGCAAGTATCTCAGAGGATAATGGGGAAGAGACTCCGTTACAGGTACGTTTGAATGGAGTAGCAACGTTTGTTGGCATAGTTGGGCTTACTGTCGCCGTTTCTGTTCTTGCAGTCCTCTTGGGAAGATACTTCTCTGGCAATACAAAAGATGTAGACGGACAAGTGCAATTTGTAGCGGGAAAGACTAGTATTAGTGATGCAGTTGACGGGGTCATCAAAATCTTTACCATTGCAGTTACAATTGTTGTTGTTGCAGTGCCTGAAGGTCTACCTTTGGCAGTTACCTTAACCCTGGCCTTCTCTATGCGGAAAATGATGGCAGACAAAGCATTGGTTCGAAGGCTATCAGCATGTGAAACTATGGGCTCCGCCACAACAATTTGTAGTGATAAGACCGGAACTTTGACCTTGAATCAGATGACTGTAGTTGAGGCATATGCTGGGAGGAAGAAACAAGATCCACCCGATGACTCGTCGAAGTTGCATCCAGAAGTTCTATCCCTCATAAATGAAGGCATTGCACAGAATACTACGGGCAATGTTTTTGTGCCTAAGGATGGTGGAGAGGCAGAGATTTCAGGATCTCCAACCGAGAAGGCAATTCTTTCTTGGGCCGTGAAGTTGGGGATGAATTTTGATCTTACCAGATCAAATTCGACAGTTCTCCACGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCTCTAAAGATGGGGGTTTCTGGAGTACATATACATTGGAAAGGAGCTGCAGAAATAGTTCTAGGAGCCTGCACTCAATATCTTGATTCAAATGGTCAGTTGCAATCTATTGAAAAAGACAAGGTATTCTTCACGGAGGCCATTGAAGACATGGCTGTCCAGAGCTTGCGCTGTGTGGCCATTGCGTACAGACCATACGAATTGGACAAAGTTCCCTCTAAGCAAGAGGATTTAGACAAGTGGTCCTTGCCAGAACAGGAGCTTATTTTGCTTGCTATTGTTGGGATAAAGGATCCTTGTCGGCCCGGAGTGAAAGAAGCTGTAAGACTATGCTCTCAAGCAGGTGTTAAGGTACGGATGGTTACGGGGGACAATCTGAATACAGCAAAGGCAATAGCTTTGGAGTGTGGAATACTGAGTTCAAAGGAAGAGGCGGTGGAGCCAAATATAATTGAAGGGAAGACATTCCGTGAACTATCTGAAATAGAAAGGGAACAAGTTGCTAAGAAAATAACGGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTCGTGCAAGCGCTGCGTAAATTGGGTGAAGTTGTTGCAGTCACAGGGGATGGCACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCCGATATTATAATTCTTGATGATAACTTTGCATCAGTAGTTAAGGTTGTTCGATGGGGCCGTTCAGTATATGCGAATATTCAAAAATTCATTCAGTTCCAACTCACTGTTAACGTTGCTGCTCTTGTAATAAATGTTGTGGCCGCCGTATCTGCTGGTGAAGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAACCTGATCATGGACACTCTTGGAGCCCTTGCACTAGCTACGGAACCACCAACTGACAGCCTTATGCGCAGATCACCAGTTGGCCGAAGGGAATCTCTTATAACTAATGTCATGTGGAGGAACTTGGTCATACAGGCTGTCTATCAAGTGACCATTCTTCTCATTCTTAATTTCGGTTGGCAAAGTATTAATTTAGGTGATGATCAAGATTCTAAATCTCACTCCTTACAAGTGAAGAATACTTTAATATTCAACACATTCGTTCTATGCCAAATATTTAACGAGTTCAATGCTAGAAAAATAGATCAAATGAATGTTTTCAAAGGAGTGACTAAGAATCGTCTCTTCATGGGAATTGTTGGAATGACATTTGTGCTTCAGATACTAATCATCGAGTTTCTCGGAAAATTCACCTCAACAGTGCGCCTTGACTGGAAACTTTGGTTATTTTCTCTTGGTATTGGGATAATCAGCTGGCCTCTTGCTGTAGTTGGAAAACTAATTCCAGTTCCGAAAACACCATGGTCACGGACCTTAAAGAAGCATATCAGACGACTCAAGAAGTCTCGTACTACTGCTGCTGCGCAACCACAATAG 2322 0.4345 MTGESKIVQKDHKAPFLMSGCKVADGVGTMLVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFVGIVGLTVAVSVLAVLLGRYFSGNTKDVDGQVQFVAGKTSISDAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAFSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYAGRKKQDPPDDSSKLHPEVLSLINEGIAQNTTGNVFVPKDGGEAEISGSPTEKAILSWAVKLGMNFDLTRSNSTVLHVFPFNSEKKRGGVALKMGVSGVHIHWKGAAEIVLGACTQYLDSNGQLQSIEKDKVFFTEAIEDMAVQSLRCVAIAYRPYELDKVPSKQEDLDKWSLPEQELILLAIVGIKDPCRPGVKEAVRLCSQAGVKVRMVTGDNLNTAKAIALECGILSSKEEAVEPNIIEGKTFRELSEIEREQVAKKITVMGRSSPNDKLLLVQALRKLGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSAGEVPLNAVQLLWVNLIMDTLGALALATEPPTDSLMRRSPVGRRESLITNVMWRNLVIQAVYQVTILLILNFGWQSINLGDDQDSKSHSLQVKNTLIFNTFVLCQIFNEFNARKIDQMNVFKGVTKNRLFMGIVGMTFVLQILIIEFLGKFTSTVRLDWKLWLFSLGIGIISWPLAVVGKLIPVPKTPWSRTLKKHIRRLKKSRTTAAAQPQ 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00009 773 Pfam haloacid dehalogenase-like hydrolase 170 494 - -
Aip08g00009 773 Gene3D - 188 380 IPR023299 GO:0000166
Aip08g00009 773 SFLD p-type atpase 155 532 IPR044492 -
Aip08g00009 773 Pfam Cation transporting ATPase, C-terminus 565 743 IPR006068 -
Aip08g00009 773 PANTHER CALCIUM-TRANSPORTING ATPASE 1 755 - -
Aip08g00009 773 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 180 377 IPR023299 GO:0000166
Aip08g00009 773 Gene3D - 3 187 - -
Aip08g00009 773 SUPERFAMILY Calcium ATPase, transmembrane domain M 49 747 IPR023298 -
Aip08g00009 773 Gene3D - 492 747 - -
Aip08g00009 773 SUPERFAMILY HAD-like 171 585 IPR036412 -
Aip08g00009 773 ProSitePatterns E1-E2 ATPases phosphorylation site. 175 181 IPR018303 -
Aip08g00009 773 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 110 199 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip08g00009 773 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 447 560 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip08g00009 773 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 1 745 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Aip08g00009 773 Pfam E1-E2 ATPase 1 151 - -
Aip08g00009 773 PRINTS P-type cation-transporting ATPase superfamily signature 373 384 - -
Aip08g00009 773 PRINTS P-type cation-transporting ATPase superfamily signature 504 516 - -
Aip08g00009 773 PRINTS P-type cation-transporting ATPase superfamily signature 173 187 - -
Aip08g00009 773 PRINTS P-type cation-transporting ATPase superfamily signature 480 499 - -
Aip08g00009 773 PRINTS P-type cation-transporting ATPase superfamily signature 395 405 - -
Aip08g00009 773 SUPERFAMILY Calcium ATPase, transduction domain A 1 46 IPR008250 -
Aip08g00009 773 SFLD C1.7: P-type atpase like 155 532 - -
Aip08g00009 773 PANTHER CATION TRANSPORTING ATPASE 1 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00009 Aip-Chr8 94305 99150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00009 1 765 Primary Pumps ATPases AT3G21180 78.954 0.0 1205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00009 K01537 - gmx:100817367 1263.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00009 08 94305 99150 Aip08g00009 08 94305 99150 ECH