Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00008 ATGGCCCGCTCTACCTCGCGGGGTTCCAACTCCTCTCCCAATGGCCTCCTCACAGTTACCATCGCTGGCGGCCGCCATGACCACGTGGACCCCGCTTCGAACAACGAAGAAGACGACGATGAACTAGTGGATCCCGATGATCCTTTTGACGTTATCCACACCAAGAACGTCCCGCTCCAGACGCTCAAGCGTTGGAGACAAGCAGCATTGGTTCTGAATGCCTCCAGGCGTTTTAGATATACTTTGGACTTGAAAAAGGAAGAGGAGAAAGAGCAAAAGAAAAGCATGATTAGAGCCCATGCACAAGTCATAAGAGCAGCTTTGCTTTTCAGATTGGCTGGGGAACGGGAACTAGTGACAAATACAGCAGCGCCATCCCTGGCAGCCCCAACTCCTGATGGTGACTATGCAGTTGGACTCGAACAACTAGTTTCGATGTTTAAGGATCAGAACGTTCTTGCTTTGCAACACTATGGAGGGGCAAGTCTACTTCAATACAACCTTTTGGGCTTAGCGGATATACTAAAATCAAATCCGGAGAAAGGCATTAGTGGAAGTGATATTGATCTATCAAAAAGGAAAATAGCATTTGGAACTAATACATATCCTCGGAAAAAGGGCAGAAGTTTCTGGAGGTTTCTTTGGGAATCTTGGCAAGATCTGACGCTTATAATATTGATTATAGCAGCTGTGGTATCATTGGCACTTGGAATAAAAACAGAGGGTTTGGAACATGGATGGTATGACGGTGGGAGCATTACTTTCGCAGTTTTTCTTGTCATTATAGTTACAGCCGTCAGTGATTATCGGCAATCTCTCCAGTTTAAGAACTTGAACGCAGAAAAACAAAATATACAATTGGAGGTGTGTAGTTTATATTACAATGACAGATAA 894 0.4474 MARSTSRGSNSSPNGLLTVTIAGGRHDHVDPASNNEEDDDELVDPDDPFDVIHTKNVPLQTLKRWRQAALVLNASRRFRYTLDLKKEEEKEQKKSMIRAHAQVIRAALLFRLAGERELVTNTAAPSLAAPTPDGDYAVGLEQLVSMFKDQNVLALQHYGGASLLQYNLLGLADILKSNPEKGISGSDIDLSKRKIAFGTNTYPRKKGRSFWRFLWESWQDLTLIILIIAAVVSLALGIKTEGLEHGWYDGGSITFAVFLVIIVTAVSDYRQSLQFKNLNAEKQNIQLEVCSLYYNDR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00008 297 PANTHER - 44 290 IPR000528 GO:0006869|GO:0008289
Aip08g00008 297 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 44 290 - -
Aip08g00008 297 Pfam Ca2+-ATPase N terminal autoinhibitory domain 46 89 IPR024750 GO:0005516
Aip08g00008 297 Gene3D - 59 111 - -
Aip08g00008 297 MobiDBLite consensus disorder prediction 1 46 - -
Aip08g00008 297 SMART Cation_ATPase_N_a_2 164 238 IPR004014 -
Aip08g00008 297 Gene3D - 190 278 - -
Aip08g00008 297 SUPERFAMILY Calcium ATPase, transmembrane domain M 170 283 IPR023298 -
Aip08g00008 297 Pfam Cation transporter/ATPase, N-terminus 170 233 IPR004014 -
Aip08g00008 297 MobiDBLite consensus disorder prediction 1 18 - -
Aip08g00008 297 Gene3D - 216 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00008 Aip-Chr8 89842 94240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00008 9 289 Primary Pumps ATPases AT3G21180 61.754 2.46e-108 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00008 K01537 - ahf:112703833 405.986