Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00006 ATGGGCGCGCGCTCGGCTTTGCTTGTGCGCGCACCTGCAGCATCCAACAATGTCCGGTTATTGTTCACGTTCGTTAACATTATTGTTGCTCTTTTGGGGATTCTATCACCGTGCTCTTCCTATTCGGATGCTGAGGCGCTCTTGAAGTTCAGGGCTTCATTGAGAAATGCGGTTGCCCTCAGCAGCTGGGATCCATCCATAAACCCAAAGCCACCGTGCTCTGGCAGCATTGCCAGTTGGGTGGGTCTGTATTGTAATCAAGACAAAGTTTGGGGGTTACGCCTGGAGAGCATGGGCCTCAACGGCAACATTGACATGGCTTCTCTCTCTTCAATGCCCGCTTTGCGGATGCTTAGCCTAATGAACAATACCTTTGCGGGTCCCTTGCCCAACATTAAGATGCTGCCCAATTTGAAGGCCCTCTTCCTGTCCTTTAATCATTTCTCCGGAGACATAGCTGATGATGCATTTGCAGGTTTGAGTCGATTGAGAAAGCTTTATTTGGCAAATAACGATTTCACCGGTAAAATTCCTTCTTCCATTGCCGCATTGCCTAGTCTCCTCTACCTCAGGCTTGATGCAAACAAGTTTCACGGCCAAATTCCCGATTTTCCACGCAGCAATGGCTTAAAGACTTTCAACCTCGCTAACAATGATTTAGAGGGCCCCATCCCAGCCAGTCTAAGCACCTTCGATCCTACCTCCTTTAGCGGAAACAGACGTTTATGCGGGCCACCACTGACAAATCCTTGCCCACCAGCTACAACAGGAAGCCAGGATGGTCAAGGCAAAGAGCAGGTTATGAAAACTCTAGTGATTGTGATCGGGGTGGCAGTGGTTGTAGCTTTCCTGGTTACAGTCTTAGTCATATGGCGCTTGAGACTCAAGTCCCGCGATCTCAATCAAATAAATAATAATGAGGTCCCAAAGTTCCAAGGCCAGACCTCCGACAAGTTCGTTCCTCCCGTTTACGTCAAAACCAAAAGCCTAGCGGAACAATATGATGCTGCTACAACTCCTAAGCAGGTGCTCAGTTCTGTACATTCCAAGAAGGTGGAGCAAGGCAAGCTCGCATTCCTGAATTGTGACACCGGACTCAAGTTTGATTTGCAGGATTTGTTAAGGGCCTCGGCCGAAATTCTAGGCAGTAACACATTTGGCTCTTCTTACAAGGCCGTTATCCTGGACGGTCAAGCTGTGGTTGTCAAGAGGTACAAGCAAATGAACAATGTGCCGAGAGAGGAGTTCCATGAGCACATGAGAAGGCTTGGAAACCTCAACCATCCCAATATTCTGCCCTACATGGCCTATTACTATAGGAAAGAAGAGAAGCTCTTGATCTCTGCCTATATTCAAAATCGTTGCTTAGCCAGCCATCTTCATGGTAATCACAAGAATAAAAAGCAGGGGCTTGAGTGGCCAACCCGATTGAAAATAGTGAAAGGTGTGGCGAGGGGATTGGCCTACCTATACAACGCACTCCCAAGCGTTGTTGCGCCTCATGGTCACCTCAAATCTTCCAATGTGCTTTTGGATGAATCTTTTGAGCCCCTACTGACCGATTATGGGCTCAGTCCTTTGATCAACCTTGATCGTGCCCAACAAGTCATCATGCCTTACAAATCACCCGAGTATGCTCAACTTGGGCGTATAACAAGGAAGACTGATATGTGGAGTTTTGGAATTCTGATTCTGGAGATTTTGACAGGTAAATTTCCAGAGAACTATCTGGCACAGACACATAACAGTGATTCGGACATTGCCAGTTGGGTCAATACAATGATTACCGAGAAGCACACCAGCGACGTGTTTGACGCAGACATGGGAGGATTTGGCAATAGTAAAGCTGAATTGCTCAAACTCTTAAAGATTGGCTTGAGTTGTTGCGAGGAGAACGTGGAAAGAAGGTTAGATATCAAGGAAGCTCTTGACCAAATCGAAGACTTGAAGGAGGCTGAAAGTGATGGAGAATACTCTTCTACTTTAGTCACTTCCGACCGGGATGCCTATAGAGCCGTGTGA 2022 0.4723 MGARSALLVRAPAASNNVRLLFTFVNIIVALLGILSPCSSYSDAEALLKFRASLRNAVALSSWDPSINPKPPCSGSIASWVGLYCNQDKVWGLRLESMGLNGNIDMASLSSMPALRMLSLMNNTFAGPLPNIKMLPNLKALFLSFNHFSGDIADDAFAGLSRLRKLYLANNDFTGKIPSSIAALPSLLYLRLDANKFHGQIPDFPRSNGLKTFNLANNDLEGPIPASLSTFDPTSFSGNRRLCGPPLTNPCPPATTGSQDGQGKEQVMKTLVIVIGVAVVVAFLVTVLVIWRLRLKSRDLNQINNNEVPKFQGQTSDKFVPPVYVKTKSLAEQYDAATTPKQVLSSVHSKKVEQGKLAFLNCDTGLKFDLQDLLRASAEILGSNTFGSSYKAVILDGQAVVVKRYKQMNNVPREEFHEHMRRLGNLNHPNILPYMAYYYRKEEKLLISAYIQNRCLASHLHGNHKNKKQGLEWPTRLKIVKGVARGLAYLYNALPSVVAPHGHLKSSNVLLDESFEPLLTDYGLSPLINLDRAQQVIMPYKSPEYAQLGRITRKTDMWSFGILILEILTGKFPENYLAQTHNSDSDIASWVNTMITEKHTSDVFDADMGGFGNSKAELLKLLKIGLSCCEENVERRLDIKEALDQIEDLKEAESDGEYSSTLVTSDRDAYRAV 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00006 673 ProSiteProfiles Protein kinase domain profile. 375 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00006 673 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 657 - -
Aip08g00006 673 Gene3D Phosphorylase Kinase; domain 1 341 450 - -
Aip08g00006 673 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 19 657 - -
Aip08g00006 673 Gene3D Ribonuclease Inhibitor 157 255 IPR032675 -
Aip08g00006 673 Pfam Leucine rich repeat N-terminal domain 42 86 IPR013210 -
Aip08g00006 673 SUPERFAMILY Protein kinase-like (PK-like) 379 647 IPR011009 -
Aip08g00006 673 Gene3D Transferase(Phosphotransferase) domain 1 451 668 - -
Aip08g00006 673 SUPERFAMILY L domain-like 70 236 - -
Aip08g00006 673 Pfam Leucine rich repeat 136 197 IPR001611 GO:0005515
Aip08g00006 673 Pfam Protein kinase domain 378 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00006 673 Coils Coil 632 652 - -
Aip08g00006 673 Gene3D Ribonuclease Inhibitor 42 156 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00006 Aip-Chr8 61115 64785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00006 12 666 Receptor kinase-like Gene Family AT5G35390 46.755 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip08g00006 Pkinase 7.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00006 - - gmx:100801053 904.049