Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03550 ATGGAAGAAGTAAAAGACTGCTGCTCCAGCAATACCACCGCCACGAGAAGCAGAGGAAGAAGAAGCAGCAGCAGCACTGGCAGCTCTTCAGAGAAACGCAAACAGCAGCAGCAACAACAAGAAGAGAAGCCGTACAGAGGAATAAGGATGAGGAAGTGGGGGAAGTGGGTGGCGGAGATTAGAGAACCAAACAAGAGGTCAAGGATATGGCTGGGTTCATACACAACACCGGTGGCCGCCGCACGCGCCTACGACACCGCCGTGTTCTACCTGAGGGGGCCATCTGCGCGCCTCAACTTCCCTGAGTTGTTGCTTCAAGAGCAAACCGAAGCCGTCGAAGGAGACATCACCGCCGATTCCATACGCAAAAGAGCCACACAGGTTGGTGCCAGAGTGGACGCCGCGCTTCAGGCCTCATCAAACTCTGTTAATTCAAGCCAGACCACTTCCGAAAAACCAGACTTGAACAAGGTTCCAAAATCCGAGGAAACTGAAGAAGATTCTCTTGACCAAGATTAA 519 0.5241 MEEVKDCCSSNTTATRSRGRRSSSSTGSSSEKRKQQQQQQEEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLLQEQTEAVEGDITADSIRKRATQVGARVDAALQASSNSVNSSQTTSEKPDLNKVPKSEETEEDSLDQD 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03550 172 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Aip07g03550 172 PRINTS Ethylene responsive element binding protein signature 83 103 IPR001471 GO:0003700|GO:0006355
Aip07g03550 172 MobiDBLite consensus disorder prediction 1 47 - -
Aip07g03550 172 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700|GO:0006355
Aip07g03550 172 MobiDBLite consensus disorder prediction 136 172 - -
Aip07g03550 172 CDD AP2 45 103 IPR001471 GO:0003700|GO:0006355
Aip07g03550 172 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 4 165 - -
Aip07g03550 172 SUPERFAMILY DNA-binding domain 44 102 IPR016177 GO:0003677
Aip07g03550 172 SMART rav1_2 44 107 IPR001471 GO:0003700|GO:0006355
Aip07g03550 172 Pfam AP2 domain 45 93 IPR001471 GO:0003700|GO:0006355
Aip07g03550 172 MobiDBLite consensus disorder prediction 7 34 - -
Aip07g03550 172 Gene3D AP2/ERF domain 44 102 IPR036955 GO:0003700|GO:0006355
Aip07g03550 172 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 4 165 - -
Aip07g03550 172 MobiDBLite consensus disorder prediction 136 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03550 Aip-Chr7 125585638 125586885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03550 30 146 AP2-EREBP Transcription Factor Family AT1G46768 64.062 3.29e-52 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aip07g03550 AP2 2.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03550 K09286 - jre:109020552 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03550 07 125585638 125586885 Aip07g03550 07 125585638 125586885 ECH