Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03543 ATGACCAATATAACCTTATCACAACTGCTTCTCTTACTGTTACTGTTGTTGTTGTGGAATAATGCATCTTGTTTACTGCCTCCTCAAGATGCCGTCTCCCTAATGGCATTCAAGTCCAAAGCCGATCTCAATAACCGTCTCAACTTCGCCAACACCAGCGCCGCCGCACAACACCGCTTCTGCCACTGGCAAGGAGTCCAATGCGCCGCAAACAGAGTGGTCCGCCTCGTCATCCAGGACTTGGATCTCGGTGGCGTCTTCGCTCCGGACACACTGTCGAAGCTGGACCAGCTCCGGGTGCTGAGCCTTCACAACAACTCCCTAACCGGACCTATACCGGACCTCTCAGGTCTCACAAACCTCAAGAGTCTCTTTCTCCACAACAACCGTTTCAACGGTTCTCTCCCTCTTTCACTATTCTCCCTCCACAGGCTCCGAACCTTGGATTTCTCCCACAACAACCTGTCCGGTCACATTCCAATTGCATTCACCAAACTCGACCGCCTCTACTCCCTTCGCTTGAGTTGGAACCACTTCAACGGTACCGTTCCTCCTTTCAACCAGTCTTCTCTCAAAACCTTTGACGTTTCCTGCAACAACCTCACCGGCGCCGTTCCCGTCACACCTACATTGTTCCGTTTTGATGCTTCCTCTTTCTCTTTCAACCCGGGACTCTGCGGGGAAATCATCCACAAGGAATGCCATCCGAGTACGCCGTTTTTCGGCCCCATAGCGGCGTCTTCGCCTCCGCCAGCAGTGGTTCTCGGCCAGAGCACGGAAGTTCACGGCGTTAATGGCATTTTCCGGCAGCCGTACGAGAAGAAGCGAGACAGGACGGCAGTGATCGTGGGATTCTCCGCGGGAGTGGTTGTTCTCGTGGCATCGTTGGTGTGCTTCGCGGTGGCCGTGAGGAGGCAGAGGAGGAGCAGCGGAGGAGAAGAGAACAAGAAGGAAGGAGCAATCAGGAGGGCACAGGTAGTGGCGAAGAGTGGGAGTTTAGTATTCTGTGCGGGGGAGGCGCAGGTGTACACGCTGGAGCAGCTGATGAAGGGTTCTGCGGAGCTTTTAGGGAGAGGGTGTTTGGGCACGACTTACAAGGCGGTTCTTGATAACCGTCTGATCGTTACGGTTAAGAGGCTTGATGCTGGGAAGATGGCTGCACATGCAACAAAGGAGGTTTTCGAGCGACACATGGAATCAGTGGGTGGCCTTCGCCATCCCAATTTGGTTCCTGTAAGGGCTTATTTTCAGGCCAAGGATGAGAGGCTCGTTATCTACGATTACCAACCCAATGGCAGCCTCTTCTCCCTCATTCACGGTTCTAGATCAAGCAGGGCAAGGCCATTGCACTGGACATCGTGCTTAAAAATAGCAGAAGACGTAGCACAGGGTTTGTCCTACATCCACCAAGCATGGAGATTGGTCCACGGCAATCTCAAATCCTCCAATGTTCTCCTTGGCCCTGATTTCGAGGCCTGCATCACGGACTATTGCCTCACCATTCTGGCCAACCCATCAGACTTGCATGAAGATGCTGATTCCGCCGCCTACAGGGCTCCGGAGACTCGCAATCCCAAGCACCATCACCAACCAACACCCAAATCAGACGTTTATTCATATGGGGTTCTGCTCATGGAGCTTCTCACTGGGAAATCTCCCTCTGAGGTACCGTTCTTGGTTCCGAGCGATATGTTGAGTTGGGTGAGGTCCATAAGGGATGACAATGGTGGTGATGATAGTAGAATGGACATGCTTCTTCAGGTGGCTACGACTTGTAGCTTGACCTCGCCGGAGCAGAGACCCACCATGTGGCAAGTCTTGAAGATGTTGCAGGAGATCAAGGAGATTGTATTATTGGAGAATAATACTGAATTGGACTTGCGGCAGTAG 1890 0.5259 MTNITLSQLLLLLLLLLLWNNASCLLPPQDAVSLMAFKSKADLNNRLNFANTSAAAQHRFCHWQGVQCAANRVVRLVIQDLDLGGVFAPDTLSKLDQLRVLSLHNNSLTGPIPDLSGLTNLKSLFLHNNRFNGSLPLSLFSLHRLRTLDFSHNNLSGHIPIAFTKLDRLYSLRLSWNHFNGTVPPFNQSSLKTFDVSCNNLTGAVPVTPTLFRFDASSFSFNPGLCGEIIHKECHPSTPFFGPIAASSPPPAVVLGQSTEVHGVNGIFRQPYEKKRDRTAVIVGFSAGVVVLVASLVCFAVAVRRQRRSSGGEENKKEGAIRRAQVVAKSGSLVFCAGEAQVYTLEQLMKGSAELLGRGCLGTTYKAVLDNRLIVTVKRLDAGKMAAHATKEVFERHMESVGGLRHPNLVPVRAYFQAKDERLVIYDYQPNGSLFSLIHGSRSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLTILANPSDLHEDADSAAYRAPETRNPKHHHQPTPKSDVYSYGVLLMELLTGKSPSEVPFLVPSDMLSWVRSIRDDNGGDDSRMDMLLQVATTCSLTSPEQRPTMWQVLKMLQEIKEIVLLENNTELDLRQ 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03543 629 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 7 622 - -
Aip07g03543 629 Pfam Leucine rich repeat 119 179 IPR001611 GO:0005515
Aip07g03543 629 Gene3D Ribonuclease Inhibitor 30 139 IPR032675 -
Aip07g03543 629 Pfam Protein kinase domain 354 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03543 629 Gene3D Transferase(Phosphotransferase) domain 1 430 625 - -
Aip07g03543 629 SUPERFAMILY L domain-like 50 226 - -
Aip07g03543 629 Gene3D Ribonuclease Inhibitor 140 227 IPR032675 -
Aip07g03543 629 ProSiteProfiles Leucine-rich repeat profile. 97 119 IPR001611 GO:0005515
Aip07g03543 629 SUPERFAMILY Protein kinase-like (PK-like) 354 611 IPR011009 -
Aip07g03543 629 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 622 - -
Aip07g03543 629 ProSiteProfiles Protein kinase domain profile. 350 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03543 629 Gene3D Phosphorylase Kinase; domain 1 332 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03543 Aip-Chr7 125490034 125493743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03543 29 620 Receptor kinase-like Gene Family AT5G43020 58.665 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip07g03543 Pkinase 2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03543 - - gmx:100817172 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03543 07 125490034 125493743 Aip07g03543 07 125490034 125493743 ECH