Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03539 ATGGCTATCCAAGTCTTCGTCCTCTTCCTGCTGTTGCTCTCATCTTGTTTTGCGCCGGCAGCGGCCAAAGACACACTGTCACAAGGCTCCTCTCTTTCCGTCGAGAAGCCAACCACCGACATCCTCGTCTCCGCCAATGGTGACTTCTCCGCCGGATTCTTCCAAGTCGGCGACAACGCTTTCTGTTTCTCCGTCATGTTCACAAGGTCACAAACACCCACCCCAGTTTGGATGGCCAACCGCGACCAACCCGTCAACGGAAAATCCTCAACTCTCTCTCTCTTGAAATCCGGCAACCTTATTCTCATCGACGCCGGAAGAACCCCCTTCTGGTCCACCACCACATCCTCCTCTTCCGAAGTGCACCTCAAGCTCAACAATAACGGCAACCTCCTTCTCCAAACTTCACAAGGAACCGTCCTTTGGCAAAGCTTCGATTCACCAACGGACACCCTTCTTCCCGGTCAAAAACTAACTGATCAAGCTTTCCTTCTCTCTTCAAGAAGCACAACAAACTTCTCCTCAGGTTTCTACAAGCTCTTCTTCGACACCGACAACGTCCTCAAGTGTCTTTACAAAGGCCCTAACATCTCCAGCGTGTACTGGCCAACCCCCTATAACACAGCAAGTACTAACGGAAGATCCACCTTCAATATTTCAAGAATCGCAGTCTTAGATTCTTACGGAGCCATCTTATCCTCCGATGGCTTCCAATCCAACTCCACCGATTACCTCGCCAGACTCCACAGAAAGCTGGTCATGGATCCTGATGGAAACCCGCGTATATACAGCTTCAACCAGAATCGTAAGATGTGGGAGGTAACATGGCAAGCCATTAACGCAGCTTGTATGGTTCACGGCCTCTGCGGAGCAAATAGCTTGTGTGCTTATCATCCTGTTAATGGCAGAACTTGCTATTGCATGCAAGGATTCAAGGTTAAGGATCCCAATGACTGGACCCAAGGATGCGTCCCTGAGTTTGATGAAGAACAACTCAGTTGCAGTCGAAAAAAGAACGCATCCATAGATTTTGTGATTCTTCCAAGCACGGAGTTTTATGGTTATGAGAGCAAAGTTTACAACGTTGCAAGCTTGATACAATGCCGGAATATATGCACGCAACTTTGCGATAATTGCAAAGGTTTTCAACTCAGTTTCAATACCATTCGAGCCTATAATTGTTACCCTAAAACAGTGTTGCTTAACGGAAGAGATTCTCCTGATTTCAGTGCAGACACATATTTGAAATTGCCGAAAAAAGCTTTATTGTCTTCCAAGAAGCCTCTCAAACATTCACCAATGGAATGTTCTTCTCGTTTGTCTCAATCTTTGGATAGATTCTACCAGAAACCTAGAAGAAACTCCACGTTGAATTTCTTGCTCTGGTTCGCCAGCGCGGTAGGGGCGCTTGAATTGACAGCAATCTTGGCTGTGTGGTTCTTCTTGTTCAGAACCAACAAGCAACCTGATCATGAAGATCAACGGCTACTCCTTTCCGCTACGGGATTCCAGAGATTCAGCTATGCTGAGCTGAAAAGAGCGACAAAAGGATTCAGCCACAGCCATGAGATTGGTCGAGGCTCCGGAGGGGTTGTGTACAAAGGAAAACTAGACGATGATCGTTTTGCTGCCATCAAACGCCTCAGCAGCGACGCGAATCAAGGAGAAGCTGAATTCCTAGCCGAGTTAAGCACCATTGGGATGTTGAACCACATGAATTTGATTGACATGTGGGGTTACTGTGTTGAAGGGAAGCACAGGGTGTTGGTTTATGAGTACATGGAGCATGGTTCCTTGGCAGATTATCTGTCTTCAAACACGCTTGATTGGAAGAAAAGGTTTGATGTTGCAGTTGGAACTGCAAAAGGTCTTGCTTATTTGCACGAGGAGTGCTTGGAATGGGTGTTGCACTGCGATGTGAAGCCGCAGAACATTCTTCTAGACTCCAACTTCCAACCCAAGGTTGCGGATTTCGGGCTCTCAAAGCTTCTGAATAGAGACGAGCGTGGGAGTTCTGGGTTTTCAAGAATAAGAGGGACGCGTGGGTACATGGCTCCAGAGTGGGTTTACAATCTTCCAATAACTTCCAAGGTGGATGTTTATAGCTACGGGATTGTTGTGTTGGAAATGGTGACTGGGAAGAGCGCTATGGAGACTCATAGTCTTGATTTGAGTAGTCGCGGAATTGAGCAGCGGCGGTTGGTGACGTGGGTGAGTGACGTCATCAACGGTGCTCCCAAGACGGAGTTTTGGGTTGAGGCTATTGCGGATCCTAAATTGGAAGGCCAATATGAGACCTCGCAGGTTGAGGTTTTGGTCAAAGTGGCTTTGCAGTGTGTGCAAGATGACATGAATCAAAGACCCTCCATGAGCCAAGTGGCGGAGATGCTTCAGCCCCATGGAAAAACTCTCCTACTTTGCTTTGATCGCGTAGTTCTACAGATTAAGACCTTGTTGGCAAAGGTTGATGTGAGTGCAATGGATGTGACGAAGATGGTCATGAACGATGAATTGGTGGACGATGAGGTTTTGGAGGAAGGGGTAGATGATAATGCTGTGCAACCCCAAAATGATGAAATTATACAAATTTGA 2592 0.4715 MAIQVFVLFLLLLSSCFAPAAAKDTLSQGSSLSVEKPTTDILVSANGDFSAGFFQVGDNAFCFSVMFTRSQTPTPVWMANRDQPVNGKSSTLSLLKSGNLILIDAGRTPFWSTTTSSSSEVHLKLNNNGNLLLQTSQGTVLWQSFDSPTDTLLPGQKLTDQAFLLSSRSTTNFSSGFYKLFFDTDNVLKCLYKGPNISSVYWPTPYNTASTNGRSTFNISRIAVLDSYGAILSSDGFQSNSTDYLARLHRKLVMDPDGNPRIYSFNQNRKMWEVTWQAINAACMVHGLCGANSLCAYHPVNGRTCYCMQGFKVKDPNDWTQGCVPEFDEEQLSCSRKKNASIDFVILPSTEFYGYESKVYNVASLIQCRNICTQLCDNCKGFQLSFNTIRAYNCYPKTVLLNGRDSPDFSADTYLKLPKKALLSSKKPLKHSPMECSSRLSQSLDRFYQKPRRNSTLNFLLWFASAVGALELTAILAVWFFLFRTNKQPDHEDQRLLLSATGFQRFSYAELKRATKGFSHSHEIGRGSGGVVYKGKLDDDRFAAIKRLSSDANQGEAEFLAELSTIGMLNHMNLIDMWGYCVEGKHRVLVYEYMEHGSLADYLSSNTLDWKKRFDVAVGTAKGLAYLHEECLEWVLHCDVKPQNILLDSNFQPKVADFGLSKLLNRDERGSSGFSRIRGTRGYMAPEWVYNLPITSKVDVYSYGIVVLEMVTGKSAMETHSLDLSSRGIEQRRLVTWVSDVINGAPKTEFWVEAIADPKLEGQYETSQVEVLVKVALQCVQDDMNQRPSMSQVAEMLQPHGKTLLLCFDRVVLQIKTLLAKVDVSAMDVTKMVMNDELVDDEVLEEGVDDNAVQPQNDEIIQI 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03539 863 SMART blect_4 31 148 IPR001480 -
Aip07g03539 863 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 1 798 - -
Aip07g03539 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Aip07g03539 863 Gene3D - 149 278 IPR036426 -
Aip07g03539 863 CDD STKc_IRAK 524 799 - -
Aip07g03539 863 Gene3D Phosphorylase Kinase; domain 1 482 593 - -
Aip07g03539 863 Pfam Protein kinase domain 519 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03539 863 SMART serkin_6 518 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03539 863 Pfam S-locus glycoprotein domain 247 314 IPR000858 GO:0048544
Aip07g03539 863 ProSiteProfiles Bulb-type lectin domain profile. 17 146 IPR001480 -
Aip07g03539 863 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 205 IPR036426 -
Aip07g03539 863 ProSiteProfiles Protein kinase domain profile. 518 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03539 863 ProSiteProfiles PAN/Apple domain profile. 334 418 IPR003609 -
Aip07g03539 863 Gene3D Transferase(Phosphotransferase) domain 1 594 804 - -
Aip07g03539 863 PIRSF SRK 1 828 IPR024171 GO:0004674
Aip07g03539 863 SUPERFAMILY Protein kinase-like (PK-like) 494 797 IPR011009 -
Aip07g03539 863 PANTHER OS07G0415500 PROTEIN 1 798 - -
Aip07g03539 863 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Aip07g03539 863 Pfam D-mannose binding lectin 74 160 IPR001480 -
Aip07g03539 863 Gene3D - 19 147 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03539 Aip-Chr7 125403713 125408947 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03539 445 799 Receptor kinase-like Gene Family AT3G58690 36.074 5.69e-65 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip07g03539 Pkinase 2.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03539 - - gmx:100816469 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03539 07 125403713 125408947 Aip07g03539 07 125403713 125408947 ECH