Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03538 ATGTCAGTAGATGAACCAAACGACGTTATAGTGTCACCCAAGGGCACGTTTTCTGCTGGCTTCTACGCGATTGGCGAAAACGCTTATTGCTTTGGCGTTTGGTTTTCCCGAAACCCTACTCTTGTATGGATGGCAAATCGTGACGACCCAGTCAACGGAAAGAAATCAAAGCTCTCCCTACTCGCCAATGGTAACCTTGTTCTAGTGGATGCCGATAATTCCCATGTTTGGTCAACAGACACAGTTTCATCGCCGTCTTCTACCGTGCATTTGGTTCTGTATGACACCGGCAACCTTGTTCTAACGGAGGAGGACGGTGACGGCAACAACAACAACATGAACAGCACCGTGTTGTGGCAAAGCTTTGATTTCCCTACGGATACTCTTCTTCCTGAGCAAGTGTTCGCCCGATTCACCAAAGTAATCTCTTCGAAAAGTCAGACAAACAAGTCCACTGGTTTGTACACGTTGTTTTTCGACAACGATAACGTTCTTCGTCTTGTTTACAATGGCCCCGAAGTTTCAGGGATCTACTGGCCAGATCCTTGGAATCTGAACTGGGCCAACTTCAGGAGTAGTTACAACAGCAGCAGAGTTGCTGTCTTGGACACTCTTGGCACCTTCATTTCCTCAGATAATTTCACTTTCACCACTTCCGATCACGGTTCCGTCATCCAGCGAAGGTTGACCCTTGATCCTAATGGAAACCTTCGTGTTTATAGCCGTAGCAGTGATCAAGATGACTGGTATGTTTCGTGGCAAGCATATGCAAGACCATGCAGGATCCATGGCGTTTGTGGGCCCAATAGTTTGTGCACTTACCATACTGATTCTGCCATTAAATGCTCTTGCCTTCCCGGTCATAAGATGAAGTATTCAAATGATTGGTCTTACGGCTGCGAACCCAGATTTTCTGTATCTTGCAAGAACAATGAAAGTGGGTCGTCGTCACAGTTCTTATCTATAAGCAACGTGGAGTTGTATGGCTATGATTATGGACTCATGACAAATTACACATTAGATCAGTGTAAGGAGTTCTGCCTCCAACTATGCGATTGCAAAGGCGTTCAGTACACTTATAACAAGGCCTCTGGTACCAACAATTGTTATGTCAAGGTTCAGTTGCGGAATGCATATCGAATCCCATATTTTAATGCTGAATTTCTTTTGAAACTGCCGGTCAATAGTACCTATTCTTTTCAAGATGATCAAGTTTCAATCGTTGATAGACACAACAATCTTGATTGTCCTGTGGGTGCAGAAACAATACAACTTGAGAGGATTTATATCAAAGGGCAGGTGAGCAGATATGTTAAGTTCTTGTTATGGTTCGCTGGAGGAGTTGGGATATTTGAAATGCTGTGCATATTTGTGGTTTGGTACTTTTTGGTAAGGTTTAGGGTGCATTCTGGTGCAGATGAACGAGTGTATGACTTAGGCTTTGCAGGGTTTAGGAGATTCAGTTACTCTGAACTGAAACAAGCCACCAAAGGGTTTAGCCAAGAGATTGGAAAGGGTGCATGGGGGATTGTATACAAAGGTGTACTCTCTGATGGAAGAGTGGTGGCCGTGAAGAGACTCATGGAAGCGAATCAAGGAGAAGAGGAGTTCCTTGCTGAAGTGAGCAGCATTGGAAGGCTCAATCACATGAACTTGATTGAGATGTGGGGATACTGTGCTGAAGGGAAACACAGGCTCCTGGTTTATGAGCACATGGAGCATGGTTCTCTTGCTCAGAATCTTAGGACAAATAGATTGGATTGGTCCAAAAGGTTTGAGATTGCGTTGGGTACAGCCAAAGGTTTGTCTTATCTTCATGATGAGTGTTTGGATTGGATTTTGCATTGTGATGTAAAGCCACAGAACATTCTTCTTGATTCTAATTTTCAACCCAAGGTAGCTGATTTTGGATTGTCCAAGTTGCTTAAAAGAAGTGACACTAATAAGTACTCTAGCTTTTCCAAGATACGAGGAACAAGAGGATACATGGCTCCTGAGTGGGTTTTGAACCTCCCAATAACCTCCAAGGTTGATGTTTATAGCTATGGAATTGTTGTGTTGGAAATGTTCACTGGAAAGAGCGCAACCAAGAACCTTGGGATTAGTAGTGATGGAGTAGAGAATAATCAACATATGTACCTGGTTGCATGGCTGAGAGAGAAACAGAATATGGGATTTCGTTGTGGTTGGGTTAGTGAAATCTTAGACCCCACCATAGAAGGTGATTATGATGAAAATAAGTTGGAAGCTTTGGCTAGAGTTGCTTTGCAATGTGTAGAGGATGAGAGGGACAAAAGACCCACCATGAGCCAAGTGGTAGAGATGCTTCAGAAATATTTATAA 2343 0.4345 MSVDEPNDVIVSPKGTFSAGFYAIGENAYCFGVWFSRNPTLVWMANRDDPVNGKKSKLSLLANGNLVLVDADNSHVWSTDTVSSPSSTVHLVLYDTGNLVLTEEDGDGNNNNMNSTVLWQSFDFPTDTLLPEQVFARFTKVISSKSQTNKSTGLYTLFFDNDNVLRLVYNGPEVSGIYWPDPWNLNWANFRSSYNSSRVAVLDTLGTFISSDNFTFTTSDHGSVIQRRLTLDPNGNLRVYSRSSDQDDWYVSWQAYARPCRIHGVCGPNSLCTYHTDSAIKCSCLPGHKMKYSNDWSYGCEPRFSVSCKNNESGSSSQFLSISNVELYGYDYGLMTNYTLDQCKEFCLQLCDCKGVQYTYNKASGTNNCYVKVQLRNAYRIPYFNAEFLLKLPVNSTYSFQDDQVSIVDRHNNLDCPVGAETIQLERIYIKGQVSRYVKFLLWFAGGVGIFEMLCIFVVWYFLVRFRVHSGADERVYDLGFAGFRRFSYSELKQATKGFSQEIGKGAWGIVYKGVLSDGRVVAVKRLMEANQGEEEFLAEVSSIGRLNHMNLIEMWGYCAEGKHRLLVYEHMEHGSLAQNLRTNRLDWSKRFEIALGTAKGLSYLHDECLDWILHCDVKPQNILLDSNFQPKVADFGLSKLLKRSDTNKYSSFSKIRGTRGYMAPEWVLNLPITSKVDVYSYGIVVLEMFTGKSATKNLGISSDGVENNQHMYLVAWLREKQNMGFRCGWVSEILDPTIEGDYDENKLEALARVALQCVEDERDKRPTMSQVVEMLQKYL 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03538 780 CDD B_lectin 10 125 IPR001480 -
Aip07g03538 780 Pfam Protein kinase domain 500 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03538 780 ProSiteProfiles Bulb-type lectin domain profile. 1 114 IPR001480 -
Aip07g03538 780 SMART ntp_6 314 392 IPR003609 -
Aip07g03538 780 SMART blect_4 1 125 IPR001480 -
Aip07g03538 780 Gene3D Transferase(Phosphotransferase) domain 1 572 780 - -
Aip07g03538 780 Gene3D - 4 122 IPR036426 -
Aip07g03538 780 ProSiteProfiles Protein kinase domain profile. 497 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03538 780 CDD PAN_AP_plant 304 393 - -
Aip07g03538 780 ProSiteProfiles PAN/Apple domain profile. 308 388 IPR003609 -
Aip07g03538 780 Gene3D Phosphorylase Kinase; domain 1 470 571 - -
Aip07g03538 780 SMART serkin_6 497 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03538 780 PIRSF SRK 1 780 IPR024171 GO:0004674
Aip07g03538 780 Pfam D-mannose binding lectin 40 136 IPR001480 -
Aip07g03538 780 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Aip07g03538 780 CDD STKc_IRAK 503 778 - -
Aip07g03538 780 SUPERFAMILY alpha-D-mannose-specific plant lectins 31 143 IPR036426 -
Aip07g03538 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Aip07g03538 780 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 4 778 - -
Aip07g03538 780 Pfam PAN-like domain 314 373 IPR003609 -
Aip07g03538 780 SUPERFAMILY Protein kinase-like (PK-like) 480 776 IPR011009 -
Aip07g03538 780 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 778 - -
Aip07g03538 780 Pfam S-locus glycoprotein domain 189 291 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03538 Aip-Chr7 125393536 125395878 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03538 465 776 Receptor kinase-like Gene Family AT3G58690 40.606 1.37e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip07g03538 Pkinase 1.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03538 - - gmx:100792388 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03538 07 125393536 125395878 Aip07g03538 07 125393536 125395878 ECH