Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03525 ATGTGCTCCGGCGAGTCAACTATGAACGGCGCTCAGTCGCGAGACGATGAGTCGAAAGAAGACGACAGGGACGCAGAAGCGAACCGACTGCTGCACCAGCAGCAGCAGAAGCAATCGACGTCATCGAAGGATGACGAAGAGGTGGCGTACGAGGCAGGGGAGAAGATCCAGGTGGTAGATTTCGACTCGGTGGACGGCGATGACGATTCAGGTGTTCCCCCTCCGTTCTCGTGGAAGAAGCTGTGGCTGTTCACTGGTCCCGGGTTCCTGATGAGCATAGCGTTCTTGGATCCGGGGAATCTCGAAGGGGATCTCCAGGCTGGAGCCATCGCAGGGTACACGCTTCTATGGCTGCTGATGTGGGCCACCTTCATGGGCCTCTTAATACAGCTTCTCTCGGCAAGGATTGGGGTGGCCACTGGGCGCCACCTGGCAGAGCTATGCAGGGAGGAATATCCCAATTGGGCGAGGCTAGTTCTATGGTTCATGGCCGAGCTGGCACTCATTGGGGCTGATATTCAAGAGGTCATTGGCAGTGCCATCGCTATCCAAATTCTGAGCCGCGGGGTTTTCCCACTCTGGCTTGGAGTTTTGATTACCGCTTCTGATTGTTTTGTCTTTCTATTTCTTGAGAACTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGCAGTTCTCATTGTTACTATGGCTCTTTCTTTTGCCTGGATGTTTGCTGACACGAAACCTAGTGGGAAAGAACTTTTGACGGGTATTTTGCTTCCAAGACTTAGCTCGAAAACAATTCGTCAAGCTGTCGGTGTTGTTGGTTGTGTCATAATGCCTCACAATGTATTCTTGCATTCTGCTTTAGTGCAGTCAAGGAAGATAGATCCCCAGAAGAAAGGCCGGGTACAGGAGGCTCTCAACTACTATACAATTGAATCAACAGTTGCACTTGCAGTCTCCTTCATGATCAATCTATTTGTCACGACAGTTTTTGCTAAGGGATTTTATGGCACAAAGCAGGCTGATAGCATGGGATTGGTGAATGCAGGGCAGTACCTTGAGGAAAAGTACGGAGGAGGGATCTTCCCCATTCTTTATATATGGGGCATTGGGTTATTGGCAGCTGGACAGAGTAGCACCATCACAGGCACATATGCTGGCCAATTCATAATGGGTGGTTTCCTCAACCTTCGGTTAAAGAAATGGTTGAGAGCATTGATCACTCGTAGTTTTGCAATTGTGCCAACTATAGTCGTAGCTATTGTTTTTAATACATCAGAAGCCTCATTGGATGTTTTGAATGAATGGCTTAATGTGCTTCAGTCCATGCAAATTCCCTTTGCACTGATTCCCCTCCTGACCTTGGTCTCCAAGGAGCATATCATGGGGACCTTTAGGGTTGGGCCTGTTCTTGAGAGGGTGGCATGGACTATTGCTGCACTTATAATGGTAATTAATGGGTATCTCTTGTTAGATTTCTTCCTGTCTGAGGTGAAGGGCCTGCTGCTTGGTTTTGTAGTTTGTTCATGCACAGCTGCCTATGTTGCATTCATTGCATATTTGGTTTCTCAGAGCGGTGCTCTTCCACACACTTGGGTTAATAGAATCCCCAAGGGTTTTTCTCTCCTCCAAATTGAATCAACAAATTCATACGACATTAAAAATCCGGAAAATAGTACTGCAAACTCCAGCTAA 1680 0.4786 MCSGESTMNGAQSRDDESKEDDRDAEANRLLHQQQQKQSTSSKDDEEVAYEAGEKIQVVDFDSVDGDDDSGVPPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYTLLWLLMWATFMGLLIQLLSARIGVATGRHLAELCREEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSRGVFPLWLGVLITASDCFVFLFLENYGVRKLEAAFAVLIVTMALSFAWMFADTKPSGKELLTGILLPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPQKKGRVQEALNYYTIESTVALAVSFMINLFVTTVFAKGFYGTKQADSMGLVNAGQYLEEKYGGGIFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTIVVAIVFNTSEASLDVLNEWLNVLQSMQIPFALIPLLTLVSKEHIMGTFRVGPVLERVAWTIAALIMVINGYLLLDFFLSEVKGLLLGFVVCSCTAAYVAFIAYLVSQSGALPHTWVNRIPKGFSLLQIESTNSYDIKNPENSTANSS 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03525 559 Hamap Divalent metal cation transporter MntH [mntH]. 66 489 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03525 559 Pfam Natural resistance-associated macrophage protein 102 463 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03525 559 PRINTS Natural resistance-associated macrophage protein signature 160 186 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03525 559 PRINTS Natural resistance-associated macrophage protein signature 190 209 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03525 559 PRINTS Natural resistance-associated macrophage protein signature 215 236 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03525 559 PRINTS Natural resistance-associated macrophage protein signature 264 287 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03525 559 PRINTS Natural resistance-associated macrophage protein signature 371 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03525 559 PRINTS Natural resistance-associated macrophage protein signature 399 416 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03525 559 PRINTS Natural resistance-associated macrophage protein signature 433 452 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03525 559 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 79 457 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip07g03525 559 MobiDBLite consensus disorder prediction 12 30 - -
Aip07g03525 559 MobiDBLite consensus disorder prediction 1 49 - -
Aip07g03525 559 PANTHER BNAC08G04640D PROTEIN 28 529 - -
Aip07g03525 559 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 28 529 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03525 Aip-Chr7 125294839 125298628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03525 15 520 Inorganic Solute Cotransporters AT1G47240 78.458 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03525 K21398 - gmx:100795013 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03525 07 125294839 125298628 Aip07g03525 07 125294839 125298628 ECH