Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03515 ATGAGCTGCAACGGTTGCCGGGTGCTCCGCAAGGGATGCAGCGACATGTGCCCCCTGAGGACATGCCTCCACTGGATTCCATCCCCTCAGGCACAAGCTCACGCCACTCTCTTCCTCGCTAAGTTCTTTGGCCGCTCCGATCTCTTCTCCTTCATTTCCTCTGTCCCACACAACAACAGGCCCGAGTTGTTTCAGTCTCTGCTTTATGAAGCTTGCGGACGAACCATCAATCCCGTCAATGGCGCCGTGGGCCTGCTCTCCACTGGTAACTGGCACCTCTGCGAGGCTGCCCTCCGCACTGTCCTTACCGGCGGCGTCCTCACCGCGTTGCCGGAGGAGGTCATCATGCCAGTCTTGGACGACTCTTCCGCTTCTCATGCTGCTCTTCATTTCAACAACACAAGCTTATCAGAGGCGTCCAAGAGGCGTAGCGTTAGCGGTGTTTCAACGCCACCCGCTGTGTCAGTTGTTTCGGGAGAACCATCGGAGATGAGCTTTGATGATGGCATTTGCAGTCACAACCAGAGAAAACTCTTGAATCTTTTCGTGTAA 552 0.5543 MSCNGCRVLRKGCSDMCPLRTCLHWIPSPQAQAHATLFLAKFFGRSDLFSFISSVPHNNRPELFQSLLYEACGRTINPVNGAVGLLSTGNWHLCEAALRTVLTGGVLTALPEEVIMPVLDDSSASHAALHFNNTSLSEASKRRSVSGVSTPPAVSVVSGEPSEMSFDDGICSHNQRKLLNLFV 183
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03515 183 MobiDBLite consensus disorder prediction 141 160 - -
Aip07g03515 183 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 144 - -
Aip07g03515 183 MobiDBLite consensus disorder prediction 141 156 - -
Aip07g03515 183 Pfam Lateral organ boundaries (LOB) domain 2 98 IPR004883 -
Aip07g03515 183 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 144 - -
Aip07g03515 183 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip07g03515 Aip-Chr7 125195309 125196203 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03515 1 112 AS2 family AT3G49940 71.429 2.89e-56 176
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip07g03515 LOB 6.6e-24 No_clan
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03515 07 125195309 125196203 Aip05g00575 05 6886391 6887786 ECH
Aip07g03515 07 125195309 125196203 Aip01g01087 01 23962272 23963729 ECH
Aip07g03515 07 125195309 125196203 Aip09g03793 09 144673522 144674147 ECH
Aip07g03515 07 125195309 125196203 Aip07g03515 07 125195309 125196203 ECH