Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip07g03515 | ATGAGCTGCAACGGTTGCCGGGTGCTCCGCAAGGGATGCAGCGACATGTGCCCCCTGAGGACATGCCTCCACTGGATTCCATCCCCTCAGGCACAAGCTCACGCCACTCTCTTCCTCGCTAAGTTCTTTGGCCGCTCCGATCTCTTCTCCTTCATTTCCTCTGTCCCACACAACAACAGGCCCGAGTTGTTTCAGTCTCTGCTTTATGAAGCTTGCGGACGAACCATCAATCCCGTCAATGGCGCCGTGGGCCTGCTCTCCACTGGTAACTGGCACCTCTGCGAGGCTGCCCTCCGCACTGTCCTTACCGGCGGCGTCCTCACCGCGTTGCCGGAGGAGGTCATCATGCCAGTCTTGGACGACTCTTCCGCTTCTCATGCTGCTCTTCATTTCAACAACACAAGCTTATCAGAGGCGTCCAAGAGGCGTAGCGTTAGCGGTGTTTCAACGCCACCCGCTGTGTCAGTTGTTTCGGGAGAACCATCGGAGATGAGCTTTGATGATGGCATTTGCAGTCACAACCAGAGAAAACTCTTGAATCTTTTCGTGTAA | 552 | 0.5543 | MSCNGCRVLRKGCSDMCPLRTCLHWIPSPQAQAHATLFLAKFFGRSDLFSFISSVPHNNRPELFQSLLYEACGRTINPVNGAVGLLSTGNWHLCEAALRTVLTGGVLTALPEEVIMPVLDDSSASHAALHFNNTSLSEASKRRSVSGVSTPPAVSVVSGEPSEMSFDDGICSHNQRKLLNLFV | 183 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip07g03515 | 183 | MobiDBLite | consensus disorder prediction | 141 | 160 | - | - | |
Aip07g03515 | 183 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN | 1 | 144 | - | - | |
Aip07g03515 | 183 | MobiDBLite | consensus disorder prediction | 141 | 156 | - | - | |
Aip07g03515 | 183 | Pfam | Lateral organ boundaries (LOB) domain | 2 | 98 | IPR004883 | - | |
Aip07g03515 | 183 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 144 | - | - | |
Aip07g03515 | 183 | ProSiteProfiles | LOB domain profile. | 1 | 107 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip07g03515 | Aip-Chr7 | 125195309 | 125196203 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip07g03515 | 1 | 112 | AS2 family | AT3G49940 | 71.429 | 2.89e-56 | 176 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Aip07g03515 | LOB | 6.6e-24 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip07g03515 | 07 | 125195309 | 125196203 | Aip05g00575 | 05 | 6886391 | 6887786 | ECH | |
Aip07g03515 | 07 | 125195309 | 125196203 | Aip01g01087 | 01 | 23962272 | 23963729 | ECH | |
Aip07g03515 | 07 | 125195309 | 125196203 | Aip09g03793 | 09 | 144673522 | 144674147 | ECH | |
Aip07g03515 | 07 | 125195309 | 125196203 | Aip07g03515 | 07 | 125195309 | 125196203 | ECH |