Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03509 ATGGAAGCTGTTGGTGTTGGAGCCTTCCCTGAAGGAGAATGGGATTGCATTTACAGAATATTTTCAATTGAAGAAGATGGGAACACAGAAATTGAATCCATGTTTTCTCCCACCCCTAATTTGCAGTATATTTGTCAAGAGAGTAGTAATAGCATATTTGATAATGATTTTCACTTTCACATGATGATGATGATGATGATGGATAATGAGAAAAACCATGATGGGGTTTTTGTTCCTTCTATTATGGAAGAACATGTCACAATGAATGAAGATGATAAGACAAGTGAAAATCCTGAATTGCCACTAGATAACAAGAAAAAGGTTCGTGTTTCAAAAGATAGGAAGGATAATGAAGTAGGGAACAAGAAGAAGCAGAAGGTGGAGAGTAATGGGAAAGAAATAGAAGAAAATAATGCAGAATCAGATGGACTTGGCACTACTGATAATTATACCGCTTTAGAAGATGATAATGGCACTAATAATGATAATAAGGAGGAGAATAGTGGAGGAGCTACTTCTTCAGCATTGAACTCAAATGGGAAGACAAGAGTTACTAGAGGATCAGCAACAGATCCTCAAAGCCTTTATGCAAGGAGGAGAAGAGAGAGGATTAATGAGAGACTAAGAACTCTACAGAGTCTTGTTCCCAATGGAACAAAGGTTGATATAAGCACAATGCTAAAAGAAGCAGTGCATTACGTGAAATTTTTGCAGCTACAGATCAAGCTTTTGAGCTCTGATGATTTGTGGATGTACGCTCCGATAGCTTATAATGGATTTGACATTGGACTCATCAATCTATCTCCTCAACAACATTAA 819 0.3712 MEAVGVGAFPEGEWDCIYRIFSIEEDGNTEIESMFSPTPNLQYICQESSNSIFDNDFHFHMMMMMMMDNEKNHDGVFVPSIMEEHVTMNEDDKTSENPELPLDNKKKVRVSKDRKDNEVGNKKKQKVESNGKEIEENNAESDGLGTTDNYTALEDDNGTNNDNKEENSGGATSSALNSNGKTRVTRGSATDPQSLYARRRRERINERLRTLQSLVPNGTKVDISTMLKEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGFDIGLINLSPQQH 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03509 272 SMART finulus 194 243 IPR011598 GO:0046983
Aip07g03509 272 PANTHER TRANSCRIPTION FACTOR BHLH139-LIKE 28 262 - -
Aip07g03509 272 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 188 237 IPR011598 GO:0046983
Aip07g03509 272 MobiDBLite consensus disorder prediction 140 192 - -
Aip07g03509 272 MobiDBLite consensus disorder prediction 88 198 - -
Aip07g03509 272 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 254 IPR036638 GO:0046983
Aip07g03509 272 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 28 262 - -
Aip07g03509 272 MobiDBLite consensus disorder prediction 88 139 - -
Aip07g03509 272 Pfam Helix-loop-helix DNA-binding domain 198 238 IPR011598 GO:0046983
Aip07g03509 272 Gene3D - 188 245 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03509 Aip-Chr7 125128046 125130286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03509 103 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 56.647 3.75e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip07g03509 HLH 4.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03509 - - aip:107607960 523.087