Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03507 ATGATACTTGCTGTATGTGCTTTGGTCTCTTTGGTGGTTGGAATAGTCATGGAAGGATGGCCCAAGGGTGCACATGATGGACTTGGTATTGTTGCAAGCATATTGCTTGTGGTGTTTGTTACTGCCACTAGTGATTACAGACAATCCTTGCAGTTTAAGGATCTAGATAAAGAGAAGAAAAAAATTGTGGTGCAGGTCACCCGAAATGGTTGTAGACAGAAGCTTTCAATATATGATTTACTTCCTGGGGATATTGTACATCTTAATATTGGAGACCAGGTCCCTGCTGATGGGCTTTTTGTCTCTGGTTTCTCTCTGTTAATAAATGAATCAAGTTTGACTGGAGAGAGTGAACCAGTGAATGTCAGTAACCTAAATCCTTTTCTTCTCTCAGGAACCAAAGTTCAGGATGGATCGTGCAAGATGCTTGTGACAACTGTTGGAATGAGAACCCAGTGGGGTAAACTAATGGCTACTCTAAGTGAAGGGGGAGATGATGAAACTCCACTGCAGGTTAAACTCAATGGTGTAGCTACTATTATTGGGAAAATTGGCCTTTTTTTTGCTGTTGTGACTTTTTCTGTGTTGGTCCAAGGACTGTTCAGCCGCAAGCTGCAAGAAGGATCCCAGTGGACATGGTCTGGTGATGATGCCATGAAAATTGTGGAGTTCTTTGCTATTGCAGTTACTATTGTTGTCGTTGCTGTCCCAGAGGGTTTACCTTTGGCTGTTACATTGAGTCTTGCTTTTGCCATGAAAAAGATGATGAATGATAAGGCACTTGTTCGTAATTTGGCTGCTTGTGAGACAATGGGCTCTGCCACTACTATCTGCAGTGACAAGACTGGCACACTAACTACTAACCATATGACTGTTGTAAAAGCTTGCATATGTGGGAAGATTAAAGAAGTAAAGGGCTCTAAAGTGCCTTCTGATTTCTCATCTGATATTCCTGATTCTGCTGTGGCAATTTTACTTCAATCAATATTTAACAACACTGGGGGAGAAGTTGTAAAAAACATGGATGAGAAGGTTGAGATTCTGGGATCACCGACAGAGACTGCACTCTTGGAATTTGGGCTGTCACTTGGAGGTGATTTCCACAAGGAGCGACAAGCAGGGAAACTTGTGAAAATTGAACCATTTAACTCTCTAAAGAAGCGCATGGGAGTGGTTCTACAGCTTCCTGAAGGTAGCTTCAGAACACATTGCAAAGGTGCCTCTGAAATAATTCTAGCTGCATGTGAAAAGGTTGTGAACTCAAATGGTGAGGTTGTTCCCCTTGAAGAAGACTCTATCAATTACTTGAAGGATACGATCGAAAAATTTGCTGATGAAGCTCTCCGGACCCTTTGCCTTGCATATGTGGATATTGATGATCATTTTTCAGTTGAGACTCCTATCCCCAATCGAGGTTACACATGTATAGGAATTGTGGGTATTAAAGATCCTGTTCGCCCTGGAGTTCGAGAGTCTGTTGCCATTTGTAGGTCAGCTGGTGTTACTGTTAGGATGGTTACTGGAGACAACATAAACACTGCAAAGGCTATTGCTAGAGAATGTGGAATTTTAACGGATGGAATTGCAATTGAAGGCCCTGAGTTCCGTGAAAAGAGTGAGGAAGAATTGCTTAAAATAATTCCAAAACTTCAGGTGATGGCTCGATCTTCTCCCATGGATAAGCATACCCTGGTGAAACAATTGAGGACAACATTTGAAGAGGTTGTTTCAGTTACCGGTGATGGTACAAATGATGCGCCTGCACTTCATGAAGCAGATATTGGGCTTGCAATGGGCATTTCTGGAACTGAGGTGGCAAAAGAAAGCGCTGATGTCATAATACTGGATGATAATTTTTCAACTATTGTGACTGTGGCCAAATGGGGCCGATCTGTCTACATAAACATACAGAAATTTGTGCAGTTCCAGCTAACTGTAAACATTGTTGCTTTGATTGTCAACTTCTCGTCTGCCTGTTTGACTGGAAATGCTCCCCTCACTGCTGTTCAACTTCTATGGGTCAACATGATTATGGACACTCTTGGAGCACTTGCTCTAGCCACTGAACCTCCTACTGATGATTTGATGAAAAGACCACCTGTCGGTAGGAAAGGAAACTTTATCAGTAATGTGATGTGGAGGAATATCTTGGGGCAGTCTCTATATCAGTTTGTTGTACTTTGGTTCCTCCAGACAAGAGGAAAAGCAGCTTTTCATCTTGATGGACCAGATTCAGAATTGATATTGAATACACTCATTTTCAACTCATTTGTGTTCTGTCAGGTTTTCAATGAGATCAGTTCCAGAGATATGGAGAAGATTAATGTTTTTGAAGGTATATTGAAGAATTATGTGTTTGTAGCGGTCCTCACTTGCACTGTCATCTTCCAAATCATAATTGTCGAATTTTTGGGCACCTTTGCAAACACCTCCCCACTTACCTTGAAGCAGTGGTTTGGTAGTGTTTTCTTTGGAGTCCTTGGAATGCCAATTGCAGCAGCTTTAAAAATGATACCTGTGGGATCTACCTAA 2532 0.4175 MILAVCALVSLVVGIVMEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIVVQVTRNGCRQKLSIYDLLPGDIVHLNIGDQVPADGLFVSGFSLLINESSLTGESEPVNVSNLNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFSVLVQGLFSRKLQEGSQWTWSGDDAMKIVEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICGKIKEVKGSKVPSDFSSDIPDSAVAILLQSIFNNTGGEVVKNMDEKVEILGSPTETALLEFGLSLGGDFHKERQAGKLVKIEPFNSLKKRMGVVLQLPEGSFRTHCKGASEIILAACEKVVNSNGEVVPLEEDSINYLKDTIEKFADEALRTLCLAYVDIDDHFSVETPIPNRGYTCIGIVGIKDPVRPGVRESVAICRSAGVTVRMVTGDNINTAKAIARECGILTDGIAIEGPEFREKSEEELLKIIPKLQVMARSSPMDKHTLVKQLRTTFEEVVSVTGDGTNDAPALHEADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNIVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRPPVGRKGNFISNVMWRNILGQSLYQFVVLWFLQTRGKAAFHLDGPDSELILNTLIFNSFVFCQVFNEISSRDMEKINVFEGILKNYVFVAVLTCTVIFQIIIVEFLGTFANTSPLTLKQWFGSVFFGVLGMPIAAALKMIPVGST 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03507 843 PANTHER CALCIUM-TRANSPORTING ATPASE 1 841 - -
Aip07g03507 843 CDD P-type_ATPase_Ca_PMCA-like 2 712 - -
Aip07g03507 843 Gene3D - 275 624 IPR023214 -
Aip07g03507 843 Gene3D - 49 161 - -
Aip07g03507 843 Pfam E1-E2 ATPase 62 256 - -
Aip07g03507 843 Gene3D - 288 484 IPR023299 GO:0000166
Aip07g03507 843 PRINTS P-type cation-transporting ATPase superfamily signature 579 598 - -
Aip07g03507 843 PRINTS P-type cation-transporting ATPase superfamily signature 477 488 - -
Aip07g03507 843 PRINTS P-type cation-transporting ATPase superfamily signature 603 615 - -
Aip07g03507 843 PRINTS P-type cation-transporting ATPase superfamily signature 109 123 - -
Aip07g03507 843 PRINTS P-type cation-transporting ATPase superfamily signature 278 292 - -
Aip07g03507 843 PRINTS P-type cation-transporting ATPase superfamily signature 499 509 - -
Aip07g03507 843 Pfam Cation transporting ATPase, C-terminus 664 838 IPR006068 -
Aip07g03507 843 SUPERFAMILY HAD-like 276 684 IPR036412 -
Aip07g03507 843 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 839 IPR023298 -
Aip07g03507 843 PRINTS H+-transporting ATPase (proton pump) signature 436 454 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g03507 843 PRINTS H+-transporting ATPase (proton pump) signature 611 636 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g03507 843 PRINTS H+-transporting ATPase (proton pump) signature 579 595 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g03507 843 PANTHER CATION TRANSPORTING ATPASE 1 841 - -
Aip07g03507 843 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 284 489 IPR023299 GO:0000166
Aip07g03507 843 SFLD C1.7: P-type atpase like 260 631 - -
Aip07g03507 843 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 1 840 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Aip07g03507 843 Pfam Cation transport ATPase (P-type) 340 418 - -
Aip07g03507 843 Gene3D - 1 837 - -
Aip07g03507 843 SFLD p-type atpase 260 631 IPR044492 -
Aip07g03507 843 ProSitePatterns E1-E2 ATPases phosphorylation site. 280 286 IPR018303 -
Aip07g03507 843 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 372 525 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g03507 843 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 545 660 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g03507 843 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 218 300 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g03507 843 SUPERFAMILY Calcium ATPase, transduction domain A 63 158 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03507 Aip-Chr7 125096752 125102534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03507 1 842 Primary Pumps ATPases AT1G27770 82.562 0.0 1416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03507 K01537 - gmx:100810758 1515.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03507 07 125096752 125102534 Aip07g03507 07 125096752 125102534 ECH