Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03506 ATGAAGAATAGAACCAGAAACATGGACGATCTGTCTTCGTGCAACCTTCTTTGTGAGGAAGAAGAAACATTTTTGGAATTGGAAAGAGATGAAGAATACTCTGCCTTTCAATCAGGAATGGATCATCAAGGTGTTTCAGAGAATGAGGATTTGGGGGTTCTGCTTGAGAGAGAGATCCGTATTGGGTTCCGAAAAGATGAGACTTTTGTGTTTGAGGATTGGATGAAACGTTCCCGCACAGATGCAATCAATTGGATTCTCAAAACAAGAGCAACATTGGGATTTCGCTTTCAAACGGCTTATTTGTCTGTCACATATTTCGATCGGTTCCTTTCCAAGCGGTCCATTGATAGTGAAAAGGAGTGGGCAATCCGATTACTATCAATTGCATGCCTTTCTTTGGCTTCAAAGATGGAAGAATGCAGTGTGCCTGAGCTATCAGTGTTTCAGTCAAAAGATTACTGCTTTGAGAGCAAAGTGATTAGGAGAATGGAGATTTTGGTGCTAACCACATTGGATTGGAATATGAGCATTATAACCCCCTATGATTTCCTTCCTTATTTCATTACAAAGTTCTGCAATCAACCCCCACCAACTACCACTTTTTCCAAGACCATGCAACTCATCTTCACCACAATCAAAGAGGTGAGCATAATGGATCACAAACCATCTGTTGTTGCAGCTGCAGCTACTTTGGTGTCATTGGATCAGCAACTAACCATAGAAGCTGTAGAGTTGAAGATTAGTTCAATTCCTCAACATAGGTTTCTTGATCCTAAAGATGTATTTTCCTGCTACAATCTAATTCAAAGATTACAAGAGGAGAATAATACAAGAAGAGACAATAACGTTTTGCATACGCCTAGTCCTTCAACAATTGACATGATAGAGAGCTCTCTAATTACTTCTTCTGCTGCTGTCACAAAGAGGAGAAGACTCTCATTTAATGATGATCAAAGTTCTGAAGGGAAGGGACTTGACTAG 984 0.4004 MKNRTRNMDDLSSCNLLCEEEETFLELERDEEYSAFQSGMDHQGVSENEDLGVLLEREIRIGFRKDETFVFEDWMKRSRTDAINWILKTRATLGFRFQTAYLSVTYFDRFLSKRSIDSEKEWAIRLLSIACLSLASKMEECSVPELSVFQSKDYCFESKVIRRMEILVLTTLDWNMSIITPYDFLPYFITKFCNQPPPTTTFSKTMQLIFTTIKEVSIMDHKPSVVAAAATLVSLDQQLTIEAVELKISSIPQHRFLDPKDVFSCYNLIQRLQEENNTRRDNNVLHTPSPSTIDMIESSLITSSAAVTKRRRLSFNDDQSSEGKGLD 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03506 327 CDD CYCLIN 78 169 IPR013763 -
Aip07g03506 327 SUPERFAMILY Cyclin-like 162 273 IPR036915 -
Aip07g03506 327 SUPERFAMILY Cyclin-like 48 176 IPR036915 -
Aip07g03506 327 SMART Cyclin_C_2 179 304 IPR004367 -
Aip07g03506 327 Pfam Cyclin, C-terminal domain 179 292 IPR004367 -
Aip07g03506 327 Gene3D - 72 177 - -
Aip07g03506 327 Gene3D - 178 240 - -
Aip07g03506 327 PANTHER CYCLINS 50 311 IPR039361 -
Aip07g03506 327 PANTHER CYCLIN-D5-1 50 311 - -
Aip07g03506 327 SMART cyclin_7 84 170 IPR013763 -
Aip07g03506 327 Pfam Cyclin, N-terminal domain 76 177 IPR006671 -
Aip07g03506 327 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03506 Aip-Chr7 125091725 125093612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03506 78 277 Core Cell Cycle Gene Families AT1G70210 39.234 6.45e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03506 K18811 - gmx:100798728 400.593