Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03501 ATGTCACTGAGTGGTAAACCCTGTCCTGAGATCAGAATTGAAGGAGAGAATTGCCCTCGTGCCGTGGTGGAATGGTACCAATGTTCTGCGTCAAAGGATCAAAGACACGATTTTGACCTGAGCTTGAAGGCGAAGAAACACCTCGTTTCGTTGGGTTGGATCTTTTCTTATTGCGACAAGAAAACTCGCTGGGAACTTCGTTACAAATCCCCTTCTGGTAAGACCTACATTTCTCTCAGAACTGCATGCAAAGCCTGCATTGAAGAGGAAAAGAAAGATTCTTCTTCATCTAGTTCCAATTCATTGCAAGGATCACAGCAATCTCAATCCCAATCTCTACCTGCTGCATCACCGTCTTCTGATCAACAACCAACGAGTTCCAAGGTTACCGGTGGTAGGCCTCGGAGACGCAAGAAACCGAGTGACGATGAAGATTGGACTCTTTCGTCTCATCAAGTATCCAATTTAGTAAGTCCTCGTTCTAGTTCTCGTGGCGGTGGCGGTGGCGGTGGCGGTCGTCGTCGTGATTCTGGTGAAATTCCTAATGCCGCAAGAAAAGTAAGAAGGGAACGGAGTTCTTCTGATAATGGTAATTTGCCGGCGTTTCGGAATCCAAGAACGATTCTTTCTTGGCTGATTGACAACAATGTGGTGGCGCAGGAGGCGTGGGTTTTCTGCTGTGGAGGGAAAGATAATGAATTCGTGAAGAGAGGGAAGCTGCTTCGTTCTGGTATTGTCTGCCATTGTTGTGAATCTTTGCTTACACTCTCTCAATTCGAGGTTCATGCCGGTTGCAATGGTCAACCTCCCTCTGCTAGTATCTTCTTGGAACAAGATAAAAGGTCTTTGTTGGATTGCCAGAAACAAGCATTGATGATGATCGAGGCTAACAACAATGGGGATAATGATCATCATCATGAAAATGATTCCATTTGTTCAATTTGTCTCAAGGGGGGTTTCATTCTTCTCTGTGATCGCTGTCCGGCTTCATTCCATGCCGAATGTATTGGCCTTGATCATGTTCCCCCTGGTGATTGGTTCTGCCCTTCATGCTCTTGCAGAATTTGCAACCGTCCCAAATGCAGAGAAGATTCTTCTAGAGAGGAAAGTCATTTGGCTAACAATTTTATAGCTTGTTTTCAGTGTCAACGCAGATTCCACCTTGGATGTTTAGCTTCTAGAGGCTTTGCTTTTCTGAACATGGAAACTGATTGTAATAAGCTTTGGTTTTGCAATGAAGCTTGTCAGAAGATATTTTTTACACTGAATAACATGTTGGGAAAACCAATTCTTGTGGGTGATGGTAATCTAACTTGGACCTTGTTGACCAGCATCAAGAAAAGCACTAATGACAATGATGACAATGGAAGCATTACTGAAATGGAGAGCAAGCTAAATGTTGCACTTGGAGTAATTCATGAGTGTTTTGAGCCCATCATAGATCCTGTATTTGGAAGAGACATTGCTGCAGATATTATGTTCAGCAGATATTCATGGCTGCCACGTATGAACTTTACAGGGTTCTACACTGTGATTCTAGAGAGGAATGATGAGGTGATCTCTGTTGCAAACACAAGGATTTATGGCCAAAAGGTTGCAGAAGTGCCGCTTGTCGCCACGAGGGACCAGTATCGAAATCAGGGAATGTGTCGAATTCTGATGGGTCAGCTTCAGAAGCTGTTGGTTAAGTTGGGTGTTGAGAGGTTGCTATTGCCTGCTGCTCCTTATTTAATAGAAACTTGGACAAACTCATTTGGATTTGCAAAAATGACACACTCAGATCAGTATTACTATGTAGGTTATCCTCTTGCAAATTTTCCAGACACAACATTGTGCCACAAATCATTGAAGCAACCTTTGATGCTAAGAATACAACCAGTATTTTACAATACAATGTTAAAAAAAACAAAAATAGGAGATCCTAACATCACACGTTCTGAAGACTACATTATAGAGTATCTTGACAATCTTTTATATGATTATCTGAACAATACACTTTTTGGGATTGTGGTTCATAAAAGGGGAGGCTACTCTAAGAATAAGAGGAAGGTGGATGAAGACTGGACCGACAGATACACAAGTCTATCAAACAGAGAAGTGAGAAGTTCTGCATATGCTGGAACCAGCCTACATAATGTAGACGTTGACACTACATCAGGTATGGAAGCAGCTGCTCGAAATATTTCATTGGAACAGCCACATAAGACTATGGAGAACAGCAAAAGTCTTGCTTTTAGACCAAGGGTTAACAATGCAGAGTCCATACACGAAAAGGGAAAGACCAAATTACAAACACAGGATGACCGTCCACTTTTGCTGAACAAAGAAATTTACAAGGAGGACAAAAGGCATGCTAGGATGGAACGATCGTTGAAGATAGCTAAGAAGAGGAAGTCCTCAGGTAATGCAAATTGTGCGGAAAAGTATCATAGAACATTGATATCAGATGATAAGGGAACGTTAATCAACCGAGAAAAATGTGATGGAAGATGTCAGAAATATGCAATGGCAGCAGGAAGCCAACAACCACTAATCCCACAAGCAAAAGCAAGACATGCTAGGATGGAAAGAGCACTCAAATTAGCTAACAAGAAGCTAAACAAAGTATCTCAGACTCAAATAGGAACAAATTATACAATTACATCCAGCAAATCTACCATGGATTGGACTCCAATGAAAGATTCAAGGGATGGTGCAAAACATGTCCTTATATGTGAACCAATCACAGATGCCAAAAATAATGTTCCAGCCACAATGGAAGGGAGAACTATTTCATATAATTCCGTGGACACCAATATGCCAATACAAGGTGCTGGTGATCACAGTATATTTAGTAGTGGTAGAGCATCACAGAGAACAAAATCAGGTAGAAAGGCAAACCAAAGGCGAAACAAAGACGTTAAAAACAATGAACCTACAAACAACAGTAAGAAGACATCCCAAAGGGCTAATAGACACGTAAATTCTGGTGAACAAACAAATATGGAGTATTTGCACATGGGATATGCAATGTATGAATGTGAACATTGTGCTGCTCTCTTTTGGTACGATGAGAGGTCAAATAAAAATTACAACACAGCGGATCCTAAGTTCAATTTATGTTGTAAAGGAGGGCAGGTGCAACTTCCACACCTACCAGAAGCCCCTAACGTGTTGTATGAGTTGTTGTTCAATAATACTCCCAAGAGCAAGCATTTTCGAGATAACATCAGATCATATAATAGCATGTTCCAGTTCACATCGATGGGTGCAAAGATAGATCGTGGTTTAAATACTTCCAGAGGTCCTCCTACATTTACACTTTTTGGGGAGAACTATCATTTAATGGGAAGTCTCATACCGCCAGAAGGAAACGTGGCAAAGTTTGCCCAATTGTATGTTTTTGATACACTAAATGAGATCAAAAACCGCTTGGCTGCTATCCGGGGTGAAGATAAAAAAGAAATACATGAAGACATTGTGAGAGACTTAAAGAAGATGCTAGATGAGAGAAATGTATTGGTGAAGGCGTTTCGCATGGTTAAGGATTCGGTCGCTAAAGATTCAAATACCACAGTCAAGCTcagattaatcggcaaaagagaaaaagatggtagaagatacaacttgccttcaacagatgaggtcgccgcattaattgtggttttgagtggggaaacaacaccgtcatcgcgcggcaaacgtattgtattgccttcatcatttacaggagggccaaggtacatgattcaaaactatcaggatgcaatggcaatttgtaaggcggtgggttatccagacctctttattacattcacatgcaatcctaagtggcctgaggtggaagacttccttaagaatagagaattaaatgcagaagatagacctgacatagtttgcagagcattcaaggctaaactggatatattgattaaagacatccgagcaaacaaaatttttggcaaagtttGTGCAGttgtatacaccatcgaatttcaaaaaagaggactaccacatgcacatatactattgttcttacataaggatgacaagtatccaactgctgaggacattgataaaatcatctcagctgagataccggataaggagttagatcctgaatactatgaagctgtggagaagcacatgatgcacggtccatgtgggatggctaggaaagattcaccatgtatggagaatggtaagtgtatacgtcgcttccccaagagattcgttgagtactcaactgtcgatgatgatgggtatccagtctacagacgcagggaagatggaaggactataaacaagtctggagttgatcttgataatcgatatgtggttccacataacaggctactattgatgagatatggggctcacataaatgttgagtggtgtaaccaatcaagatcaattaagtatttgttcaagtacgttaataatggccatgatcgtgtaacagcttcgttctacaagagtgccacagagaatgctgacctggacgaacacgacgaagtcagcatgtactatgattgcaggtacatatctccctgtgaggccgcctggagaatctttggttataacatacattatagagatccatcagtggtaagactagggtttcatttacccaatgaacaaaacgtggtatttaaagaccatgaaaaccttgatgatgtgctgagagaaacatccgtgaaggaatccatgttcctaggatggtttcaagcaaacaaggattatacagaagcaagaacactgacgtatgcagagctccccactaagtttgtatggaaggcaaaagaaagagtatggttgccccgaaaaacacattttgtgattggaagaattttctatgtgcctctaggATCAGGTGAAAGATATTATTTAAGGCTTCTACTCAATTTCGTCAAGGGACCAACTTCTTTTGAGGATATCAGGACTATAGATGATGTGGTCTATGCTACTTTCAAAGACGCCTGTTATGCACGTGGCCTTTTAGAAAATGAAAAGGAATATATTGAGGCGATCGAGGAAGCCAGCCATTGGGGTTCAGGAACATATTTGAGAAAACTCTTTGCGACACTTTTGTTTTCAAATTCGATGGATACACCAGAACATGTTTGGCAAAAGACATGGACTCTATTATGTGATGACATACTTCATAGGCAGCGAACACTTCTGGACAATTCAGgtattggtgatggtAGCCACGGAACACCAAGAGATTGTGGTGAGAGGATTGAAATCCCAGAAGACATCCTGGTTAAGGATTGGGATGACCCAATAGAGACGATCTGTAAGCTCAGACAAGGCATGCCCAACAGAATCCAACAATGA 5319 0.3132 MSLSGKPCPEIRIEGENCPRAVVEWYQCSASKDQRHDFDLSLKAKKHLVSLGWIFSYCDKKTRWELRYKSPSGKTYISLRTACKACIEEEKKDSSSSSSNSLQGSQQSQSQSLPAASPSSDQQPTSSKVTGGRPRRRKKPSDDEDWTLSSHQVSNLVSPRSSSRGGGGGGGGRRRDSGEIPNAARKVRRERSSSDNGNLPAFRNPRTILSWLIDNNVVAQEAWVFCCGGKDNEFVKRGKLLRSGIVCHCCESLLTLSQFEVHAGCNGQPPSASIFLEQDKRSLLDCQKQALMMIEANNNGDNDHHHENDSICSICLKGGFILLCDRCPASFHAECIGLDHVPPGDWFCPSCSCRICNRPKCREDSSREESHLANNFIACFQCQRRFHLGCLASRGFAFLNMETDCNKLWFCNEACQKIFFTLNNMLGKPILVGDGNLTWTLLTSIKKSTNDNDDNGSITEMESKLNVALGVIHECFEPIIDPVFGRDIAADIMFSRYSWLPRMNFTGFYTVILERNDEVISVANTRIYGQKVAEVPLVATRDQYRNQGMCRILMGQLQKLLVKLGVERLLLPAAPYLIETWTNSFGFAKMTHSDQYYYVGYPLANFPDTTLCHKSLKQPLMLRIQPVFYNTMLKKTKIGDPNITRSEDYIIEYLDNLLYDYLNNTLFGIVVHKRGGYSKNKRKVDEDWTDRYTSLSNREVRSSAYAGTSLHNVDVDTTSGMEAAARNISLEQPHKTMENSKSLAFRPRVNNAESIHEKGKTKLQTQDDRPLLLNKEIYKEDKRHARMERSLKIAKKRKSSGNANCAEKYHRTLISDDKGTLINREKCDGRCQKYAMAAGSQQPLIPQAKARHARMERALKLANKKLNKVSQTQIGTNYTITSSKSTMDWTPMKDSRDGAKHVLICEPITDAKNNVPATMEGRTISYNSVDTNMPIQGAGDHSIFSSGRASQRTKSGRKANQRRNKDVKNNEPTNNSKKTSQRANRHVNSGEQTNMEYLHMGYAMYECEHCAALFWYDERSNKNYNTADPKFNLCCKGGQVQLPHLPEAPNVLYELLFNNTPKSKHFRDNIRSYNSMFQFTSMGAKIDRGLNTSRGPPTFTLFGENYHLMGSLIPPEGNVAKFAQLYVFDTLNEIKNRLAAIRGEDKKEIHEDIVRDLKKMLDERNVLVKAFRMVKDSVAKDSNTTVKLRLIGKREKDGRRYNLPSTDEVAALIVVLSGETTPSSRGKRIVLPSSFTGGPRYMIQNYQDAMAICKAVGYPDLFITFTCNPKWPEVEDFLKNRELNAEDRPDIVCRAFKAKLDILIKDIRANKIFGKVCAVVYTIEFQKRGLPHAHILLFLHKDDKYPTAEDIDKIISAEIPDKELDPEYYEAVEKHMMHGPCGMARKDSPCMENGKCIRRFPKRFVEYSTVDDDGYPVYRRREDGRTINKSGVDLDNRYVVPHNRLLLMRYGAHINVEWCNQSRSIKYLFKYVNNGHDRVTASFYKSATENADLDEHDEVSMYYDCRYISPCEAAWRIFGYNIHYRDPSVVRLGFHLPNEQNVVFKDHENLDDVLRETSVKESMFLGWFQANKDYTEARTLTYAELPTKFVWKAKERVWLPRKTHFVIGRIFYVPLGSGERYYLRLLLNFVKGPTSFEDIRTIDDVVYATFKDACYARGLLENEKEYIEAIEEASHWGSGTYLRKLFATLLFSNSMDTPEHVWQKTWTLLCDDILHRQRTLLDNSGIGDGSHGTPRDCGERIEIPEDILVKDWDDPIETICKLRQGMPNRIQQ 1772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03501 1772 Gene3D - 463 620 - -
Aip07g03501 1772 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 492 622 IPR016181 -
Aip07g03501 1772 Coils Coil 845 872 - -
Aip07g03501 1772 Pfam PHD-finger 311 353 IPR019787 -
Aip07g03501 1772 Pfam Tify domain binding domain 238 290 IPR032308 -
Aip07g03501 1772 MobiDBLite consensus disorder prediction 94 200 - -
Aip07g03501 1772 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 619 - -
Aip07g03501 1772 MobiDBLite consensus disorder prediction 178 193 - -
Aip07g03501 1772 CDD PHD4_NSD 312 351 - -
Aip07g03501 1772 SMART PHD_3 311 352 IPR001965 -
Aip07g03501 1772 SMART PHD_3 353 415 IPR001965 -
Aip07g03501 1772 MobiDBLite consensus disorder prediction 973 991 - -
Aip07g03501 1772 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 297 376 IPR013083 -
Aip07g03501 1772 MobiDBLite consensus disorder prediction 96 130 - -
Aip07g03501 1772 Pfam Helitron helicase-like domain at N-terminus 1124 1337 IPR025476 -
Aip07g03501 1772 SUPERFAMILY FYVE/PHD zinc finger 288 353 IPR011011 -
Aip07g03501 1772 MobiDBLite consensus disorder prediction 937 991 - -
Aip07g03501 1772 ProSiteProfiles Zinc finger PHD-type profile. 309 354 IPR019787 -
Aip07g03501 1772 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 10 619 - -
Aip07g03501 1772 MobiDBLite consensus disorder prediction 937 954 - -
Aip07g03501 1772 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 456 608 IPR000182 GO:0016407
Aip07g03501 1772 CDD NAT_SF 511 571 - -
Aip07g03501 1772 MobiDBLite consensus disorder prediction 147 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03501 Aip-Chr7 124984788 124997940 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03501 186 564 PHD Transcription Factor Family AT5G58610 42.931 4.76e-89 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aip07g03501 Helitron_like_N 6.1e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03501 - - aip:107608518 1228.77