Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03499 ATGTTGTGCGCTTGCTCCGGGGAGCAATTCAAATTGGAGGAGGCGCCGCCACAGTCCCCGGATTCTCTGGCGACAAGGGATTTCTCAGCCGGTGGACTTTCTTCCAGGACTGCGGATTGGGAACCCAAAATCGATGATACCCAAGTTGACGAAGTAGAGTCCACTCTTAAAGAAGCTCTTTCCTTAAACTATGAGGAAGCCAGGGCTTTGCTGGGGAGGCTTGAGTATCAAAGAGGGAACTTTGATGCTGCTCTTCAAGTATTTCAAGGCATAGACATCAAGGGTTTGACCCCTAGGATGGTCAGAGCCATAGCTGAAAGAACCAGGCAAAGGAAACCACGTTCCAAGGCAGACATTGTGGTTGCCAATGTGATGTCATTGCATTCAGTAAGCCTCCTTCTTGAGGCAATTTTGCTTAAAGCAAAATCATTAGAGGAACTTGGCCGATATATCGAGGCTGCAAAGGAGTGCAGAATAATTGTGGATACAGTTGAATCTGCACTTCCTAAGGGAATGCCTGAGGGTATTGGTGAAGATTGCAAGTTGCAAGAAATGTTCCACAGAGCATTAGAGTTGCTTCCAAACTTATGGATCAAGGCAGGATTTTTAGATGAAGCTGTTACTGCATATCGTCGTGCTCTAATCAAGCCTTGGAATTTGGAGCATCAGAGATTGGCTGCTGTGCAAAAAGACTTAGCTAAGACCCTACTCTACAGTGGTGTTGAAGTAAGTCTACCCTCTCAGTTGCAAGTGTGGGGTCCAACAACACCCAAGAGTAACATCGAAGAAGCAATACTTTTGCTGTTAATACTCATGAGCAAGGTGGGAATTCAGGAAATTGACTGGGATGCTGAAATAATGGATCACCTTACTTTTGCTCTTTCCGTTACTGGAATGTGTGAGTCATTGACAGTTCACATAGAGCAGATCCTCCCAGGGATCTATAGTCGAGCTGAGAGGTGGTACCTTCTTGCTCTGTGTTATAGTGCAGCAGGACAGAATGAAGTAGCATTGAACCTTTTGAAGAAGGCTTGTGGTAGTTCTGAAGCAAAGCAAAGACCTCACTTCCCTTCATTTTTGTTTGGAGCAAAACTGTGTTCACAAGATCCTAGCCATGCTCATGAAGGCATTAACTTTTCGCACGAGGTTATTGATCTAGCCAAGCATCGAAATGAGCATTTCTTGGATCAAGGCTATAAATTTCTAGGCATGTGCTATGGGGCTGCAGCTAGAATTTCTGTGTTGGATTCTGAAAGAAGTATATTTCAAGGAGAGTCTCTGAAATTTTTAAATCGTGCTGTGGAGAATGGAAATGGTGGCCCGGAAGCTATATTCAGCCTTGGACTAGAAAATGCGAAGCAAAGGAATCTGGATGTGGCTTTTGACAACATGATGATGTACTCAGACATGACAGTTGGCAGCTCAGGGAGAGGTTGGCAGCTGTTAGCACTTATAGTATCCGCACAGCAGCGGTTTAAGGATGCTGAAACTATAGTTGATTTTGCTTTGGATGAGGCTGGGAGGATGGATCAGCTAGAACTTCTAAGATTGAAAGCAGTACTTCAAATTGCTCAGCAGAAACCGAAACAAGCAGTAGAGACCTACAGAATCTTGCTGGCATTAATTCATGGAAAAAAGGAGCATTGGCATGAAGATAAGAAACTTGGTCAAGCAATAGGATTCAGGCATGAGGCAATAAAAGAGAAGAATTTGGAAACAGAAGCCTGGCAGGATTTGGCTACTATTTATGCAGATATCGGTTCATTGATTGATGCAAAGTCTTGTATTGACAAAGCTCAATTAATAGAATTTTTTTCTCCAAGAAGTTGGCATATTACTGGGAGGTTGTTGGAAGCTCAATCATTATACAAGGAAGCTTTTGTTTCTTTCTCGATCTCATTATCAATCGAGCCAGATTACATTCCCAGTATTGTTTCAACTGCAGAATTGTTTCTGAAACTTGGTATGCAGTCACTTCCAATTGTAAGAAGCTTTTTAATGAATGCTTTGCGATTGGATCCCACAAACCATGATGCATGGTTCAACCTTGGATTAGTTTCAAAAAACGAAGGTTCCTTGCAGCAAGCAGCAGATTTCTTTCAAGCTGCATATGAACTGAAGCTTTCGGCTCCGATCCAAAAGTTTGAGTAA 2151 0.4296 MLCACSGEQFKLEEAPPQSPDSLATRDFSAGGLSSRTADWEPKIDDTQVDEVESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIKGLTPRMVRAIAERTRQRKPRSKADIVVANVMSLHSVSLLLEAILLKAKSLEELGRYIEAAKECRIIVDTVESALPKGMPEGIGEDCKLQEMFHRALELLPNLWIKAGFLDEAVTAYRRALIKPWNLEHQRLAAVQKDLAKTLLYSGVEVSLPSQLQVWGPTTPKSNIEEAILLLLILMSKVGIQEIDWDAEIMDHLTFALSVTGMCESLTVHIEQILPGIYSRAERWYLLALCYSAAGQNEVALNLLKKACGSSEAKQRPHFPSFLFGAKLCSQDPSHAHEGINFSHEVIDLAKHRNEHFLDQGYKFLGMCYGAAARISVLDSERSIFQGESLKFLNRAVENGNGGPEAIFSLGLENAKQRNLDVAFDNMMMYSDMTVGSSGRGWQLLALIVSAQQRFKDAETIVDFALDEAGRMDQLELLRLKAVLQIAQQKPKQAVETYRILLALIHGKKEHWHEDKKLGQAIGFRHEAIKEKNLETEAWQDLATIYADIGSLIDAKSCIDKAQLIEFFSPRSWHITGRLLEAQSLYKEAFVSFSISLSIEPDYIPSIVSTAELFLKLGMQSLPIVRSFLMNALRLDPTNHDAWFNLGLVSKNEGSLQQAADFFQAAYELKLSAPIQKFE 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03499 716 Coils Coil 57 77 - -
Aip07g03499 716 Gene3D Tetratricopeptide repeat domain 663 712 IPR011990 GO:0005515
Aip07g03499 716 SUPERFAMILY TPR-like 195 600 IPR011990 GO:0005515
Aip07g03499 716 MobiDBLite consensus disorder prediction 13 37 - -
Aip07g03499 716 PANTHER PROTEIN NPGR1 1 715 - -
Aip07g03499 716 Pfam Tetratricopeptide repeat 318 348 IPR019734 GO:0005515
Aip07g03499 716 Gene3D Tetratricopeptide repeat domain 283 548 IPR011990 GO:0005515
Aip07g03499 716 Gene3D Tetratricopeptide repeat domain 37 269 IPR011990 GO:0005515
Aip07g03499 716 SUPERFAMILY TPR-like 550 707 IPR011990 GO:0005515
Aip07g03499 716 SMART tpr_5 607 640 IPR019734 GO:0005515
Aip07g03499 716 SMART tpr_5 512 545 IPR019734 GO:0005515
Aip07g03499 716 SMART tpr_5 318 351 IPR019734 GO:0005515
Aip07g03499 716 SMART tpr_5 573 606 IPR019734 GO:0005515
Aip07g03499 716 SMART tpr_5 476 509 IPR019734 GO:0005515
Aip07g03499 716 SMART tpr_5 677 710 IPR019734 GO:0005515
Aip07g03499 716 PANTHER PROTEIN NPG1 1 715 IPR043376 -
Aip07g03499 716 Gene3D Tetratricopeptide repeat domain 549 658 IPR011990 GO:0005515
Aip07g03499 716 ProSiteProfiles TPR repeat profile. 677 710 IPR019734 GO:0005515
Aip07g03499 716 Pfam Tetratricopeptide repeat 669 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03499 Aip-Chr7 124967388 124970893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03499 1 715 Calmodulin-binding Proteins AT1G27460 58.832 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03499 K21843 - gmx:100799251 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03499 07 124967388 124970893 Aip07g03499 07 124967388 124970893 ECH