Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03491 ATGGTTGCTGGTAGGGCAAGAGCTGTTGTAGTGGGAGTTGGTCCTAACACTGCCATGGGCAACATTCGTGATTCAATGATGCACACAGAGGATGAGGCGACACCATTGAAAAAGAAGCTGGATGAGTTTGGTACCTTTTTAGCCAAGGTTATTGCAGGGATTTGCGTATTGGTGTGGATTGTAAATATTGGTCATTTTCGTGACCCTGCTCATGGTGGTTTCTTGCGTGGTGCTATTCATTATTTTAAGGTTTTCCTCCCTCTTTCTTGTACTGATTACTTTTTTATTAATAGGTGTTTGGCTCTTGGAACAAAGCGTATGGCTAGGTTGAATGCCATCGTTCGGTCTTTGCCTTCTGTTGAAACCTTGGGTTGCACCACTGTAATTTGCAGCGACAAAACTGGAACACTAACTACTAATATGATGTCAGTTGCAAAGGTGTGCGTTGTTGAATCTGCACAACGTAGTCCTGCTGCTACTGAATACAGTGTCAGTGGGACAACATATGCACCTGAAGGCATAATTTTTGACAATACAGGGATGCAGATTGACTTTCCAGCTCAATTGCCGTGTCTTCTTCACATAGCAATGTGTTCTGCTCTTTGCAATGAATCAACCCTGCAGTATAATCCTGATAAGGGAAAGTATGAAAAAATTGGTGAGTCAACTGAAGTGGCACTACGTGTCTTTGCAGAAAAGGTTGGTCTTCCTGGTTTTAATTCTATGCCATCAGCCTTGAACATGTTGAGTAACCATGAACGAGCTTCTTATTGTAACCATTATTGGGAGGAACAATTTAGAAAGATGGATGTGCTGGAATTTTCTCGAGATCGGAAAATGATGAGTGTGCTTTGCAGCAGAAACCAATTGAATGTTTTGTTCTCTAAAGGTGCTCCAGAAAGCATAATTGCTAGATGTACAACAATTCTGTGTAATGACGATGGCTCAATTGTGCCACTTACTGCTGATATTCGAGCAGAGCTGGCTTCAAGGTTCCATAGTTTTGCAGGAAAAGAAACATTGAGGTGCCTAGCTTTGGCTTTGAAATGGATGCCCTCAGGTCAACAGATGTTGTCCTTTGATGATGAGAGAGATCTTACATTTATTGGGTTGGTTGGGATGCTGGATCCACCAAGAGATGAAGTTAGAAATGCCATGCTTTCATGTATGACTGCTGGCATACGTGTTATAGTTGTCACTGGAGATAACAAGTCCACCGCTGAGTCCCTTTGCCGCAAGATAGGCGCTTTTGACCATATGATAGAATTTTCCGAGCGCTCTTATACTGCTTCTGAGTTTGAAGAACTTCCACCACTGCAACAAACTCTAGCATTGCAACGCATGGCACTTTTTACCAGAGTTGAGCCTTCTCATAAAAGGATGCTGGTTGAAGCTTTGCAAAATCAGAATGAAGTGGTTGCAATGACGGGTGATGGAGTCAATGATGCACCCGCACTGAAAAAGGCAGATATAGGAATTGCTATGGGTTCTGGAACAGCTGTTGCCAAGAGTGCATCAGACATGGTGCTCGCTGATGACAACTTTGCTTCGATTGTTGCGGCTGTAGCAGAGGGTAGAGCTATATACAACAATACAAAACAGTTTATTAGATACATGATATCATCCAATATTGGTGAAGTAGTCTGTATATTTGTCGCTGCTGTGCTTGGGATACCTGATACTCTCGCTCCTGTCCAGCTGCTTTGGGTCAATTTGGTTACTGATGGACTGCCTGCAACTGCTATTGGCTTCAATAAGCAAGACTCTGATGTGATGAAGGCTAAGCCTCGAAAGGTGAATGAAGCAGTTGTGACAGGTTGGCTCTTCTTCCGTTATCTAGTAATTGGAGCTTATGTTGGCCTTGCAACCGTTGCTGGTTTTATTTGGTGGTTTGTTTATGCTGATAGTGGCCCCAAACTACCATATGTTGAACTGATGAATTTTGACACTTGCCCAACAAGGGAGACAACTTATCCATGCAGTATATTTGATGATCGACATCCATCTACTGTATCAATGACTGTGCTTGTCGTTGTTGAGATGTTCAATGCTTTAAACAACCTTAGTGAAAATCAATCTCTTTTGGTCGTTCCTCCCTGGAGTAACATGTGGCTTGTTGCTTCTATAATCATAACTATGCTTCTTCACATACTAATTTTATATGTTCACCCGCTGTCAGTTCTTTTCTCTGTAACACCATTATCCTGGGATGACTGGATGGTTGTCTTTTATCTTTCAATACCTGTTATAATTATTGATGAAGTATTAAAGTTCTTCTCCAGAAATCCCATTGGTTTGAGGTTCAGATTGTGGTTTAGGAGGTCCGACCTACTTCCAAAAAGAGAAGTGCGTGATAAGTAA 2361 0.4202 MVAGRARAVVVGVGPNTAMGNIRDSMMHTEDEATPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPAHGGFLRGAIHYFKVFLPLSCTDYFFINRCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKVCVVESAQRSPAATEYSVSGTTYAPEGIIFDNTGMQIDFPAQLPCLLHIAMCSALCNESTLQYNPDKGKYEKIGESTEVALRVFAEKVGLPGFNSMPSALNMLSNHERASYCNHYWEEQFRKMDVLEFSRDRKMMSVLCSRNQLNVLFSKGAPESIIARCTTILCNDDGSIVPLTADIRAELASRFHSFAGKETLRCLALALKWMPSGQQMLSFDDERDLTFIGLVGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDHMIEFSERSYTASEFEELPPLQQTLALQRMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVNEAVVTGWLFFRYLVIGAYVGLATVAGFIWWFVYADSGPKLPYVELMNFDTCPTRETTYPCSIFDDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVVPPWSNMWLVASIIITMLLHILILYVHPLSVLFSVTPLSWDDWMVVFYLSIPVIIIDEVLKFFSRNPIGLRFRLWFRRSDLLPKREVRDK 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03491 786 SUPERFAMILY HAD-like 363 524 IPR036412 -
Aip07g03491 786 Pfam Cation transporting ATPase, C-terminus 560 759 IPR006068 -
Aip07g03491 786 ProSitePatterns E1-E2 ATPases phosphorylation site. 132 138 IPR018303 -
Aip07g03491 786 Pfam Cation transport ATPase (P-type) 200 309 - -
Aip07g03491 786 Gene3D - 127 520 IPR023214 -
Aip07g03491 786 Gene3D - 140 377 IPR023299 GO:0000166
Aip07g03491 786 PANTHER CALCIUM-TRANSPORTING ATPASE 2 764 - -
Aip07g03491 786 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 447 561 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g03491 786 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 25 157 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g03491 786 TIGRFAM ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 2 633 IPR005782 GO:0005388|GO:0006816|GO:0016021
Aip07g03491 786 Pfam E1-E2 ATPase 2 109 - -
Aip07g03491 786 PRINTS H+-transporting ATPase (proton pump) signature 476 492 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g03491 786 PRINTS H+-transporting ATPase (proton pump) signature 507 532 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g03491 786 PRINTS H+-transporting ATPase (proton pump) signature 448 464 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip07g03491 786 Gene3D - 28 761 - -
Aip07g03491 786 SUPERFAMILY Calcium ATPase, transmembrane domain M 29 761 IPR023298 -
Aip07g03491 786 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 137 374 IPR023299 GO:0000166
Aip07g03491 786 Pfam haloacid dehalogenase-like hydrolase 369 490 - -
Aip07g03491 786 SFLD p-type atpase 111 528 IPR044492 -
Aip07g03491 786 Gene3D - 2 27 - -
Aip07g03491 786 SFLD C1.7: P-type atpase like 111 528 - -
Aip07g03491 786 PRINTS P-type cation-transporting ATPase superfamily signature 476 495 - -
Aip07g03491 786 PRINTS P-type cation-transporting ATPase superfamily signature 130 144 - -
Aip07g03491 786 PRINTS P-type cation-transporting ATPase superfamily signature 392 402 - -
Aip07g03491 786 PRINTS P-type cation-transporting ATPase superfamily signature 370 381 - -
Aip07g03491 786 PRINTS P-type cation-transporting ATPase superfamily signature 499 511 - -
Aip07g03491 786 PANTHER SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 3 2 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03491 Aip-Chr7 124904759 124916962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03491 1 786 Primary Pumps ATPases(2) AT1G10130 81.542 0.0 1342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03491 K05853 - gmx:100783509 1435.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03491 07 124904759 124916962 Aip07g03491 07 124904759 124916962 ECH