Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03481 ATGCACTTGAGCAAAGCCATGACCTTCCAAGACCACGAGCTGGTTCAGTTCATGCTGACCGAAACCGAAATACAGGACCTGTTTTCCCTCATTAACCACCATCCGGGCAGCCCCCCTAGTAGCTCCGGCTCGCAGGGGTCGAACCGGTCGGTTTACTCGAGCGAGGAAAGAAAGCTGAGGCGCATGCAGTCAAACCGGGAATCGGCCCGAAGGTCCCGCGGCAGGAAAAAAAAGCACATGGAGAATCTGACGGTCCAATTGAACCGGTTGAGAGTCGATAATCGAGAACTGAAGAACCAGCTACTCGTGACCATGCACCAGCATCTTCTACTCTCCCTTGAGAATGAGAAGCTATGTTCCGAATCCATTGCACTAAGCGCCACACTTTCCGATCTTTGCCAGATTTTGCGCACCATTCTTCCACAATAA 429 0.5198 MHLSKAMTFQDHELVQFMLTETEIQDLFSLINHHPGSPPSSSGSQGSNRSVYSSEERKLRRMQSNRESARRSRGRKKKHMENLTVQLNRLRVDNRELKNQLLVTMHQHLLLSLENEKLCSESIALSATLSDLCQILRTILPQ 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03481 142 PANTHER BZIP TRANSCRIPTION FACTOR 44 27 140 - -
Aip07g03481 142 Gene3D - 55 110 - -
Aip07g03481 142 SUPERFAMILY Leucine zipper domain 57 109 IPR046347 GO:0003700|GO:0006355
Aip07g03481 142 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 60 75 IPR004827 GO:0003700|GO:0006355
Aip07g03481 142 Pfam bZIP transcription factor 56 101 IPR004827 GO:0003700|GO:0006355
Aip07g03481 142 Coils Coil 52 72 - -
Aip07g03481 142 MobiDBLite consensus disorder prediction 34 52 - -
Aip07g03481 142 Coils Coil 80 100 - -
Aip07g03481 142 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 55 101 IPR004827 GO:0003700|GO:0006355
Aip07g03481 142 SMART brlzneu 53 117 IPR004827 GO:0003700|GO:0006355
Aip07g03481 142 PANTHER BZIP TRANSCRIPTION FACTOR 27 140 - -
Aip07g03481 142 CDD bZIP_plant_GBF1 58 108 IPR045314 GO:0003700|GO:0006355
Aip07g03481 142 MobiDBLite consensus disorder prediction 53 69 - -
Aip07g03481 142 MobiDBLite consensus disorder prediction 30 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03481 Aip-Chr7 124766304 124767239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03481 19 136 bZIP Transcription Factor Family AT3G49760 36.800 1.71e-18 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip07g03481 bZIP_1 8.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03481 - - gmx:102661984 169.859