Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03480 ATGGATCTTGGGGCGGTGGGTTTGGATGGGTTGGTGGGTGTGGGTGGTTCTATTGGGTGTTCAGATGGTGAGACAAAGCACAAGTGGTACGGATCTGGGTTGTTGAAGCAGGAGAGATCTGGCGGTGGCAACACAAACAACGAAGATGATGATGAATATTGGAGGAGCAACAAAGTGGCCAAGACTAGTATTAATGGCGAGAGGAACTCGTCATCAAGCTTGCTGAGATCCAATGCAAGTCTCTTCTCTGATGTTGGTGGCAACAACCAGCAGCAGCAACAAATGCTAAGTTTCTCTTCACCAAAGTCAGACACATTCCCATATCATTACCTTCCCTTATCAAGAAATACAGGTTGTCACAGTTGGGGAAGCAATAGCATGCATGGGAATGGGAATGGGAATGGGATTGGGATGAGAGGGGCATTCACTCCATCACAGTGGATGGAGCTAGAACAGCAGGCCCTGATCTACAAGTATATAACCGCTAATGTCCCTGTCCCATCTCATCTTCTTATTCCCATCAAGAAAGCCCTTCATTCTGCTGGCTTCTCTCACTTCTTCAGGCCCAGTGCAGTGGGCTGGGCTGGGTTCCATCTGGGCTTCTCTAACAGCACCGATCCCGAGCCAGGCAGGTGCCGGAGAACAGATGGCAAGAAATGGCGTTGCTCCCGAGATGCCGTTGTCGACCAGAAGTATTGTGAGCGGCACATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCACAATGGCCATGCCCTCACCGGGACAACCACCTCCACCACCACCAAGAATGTGGTGCCCGGAAACACTCCTCCTCCTTATTCTTCACCTCCTAATACCATCAGCAGGATGTTTATGACTACTACTACTACTACTAATAATAAGGAGAGTAATGGTAGTGAGAGAATCCCAGAAGCTGAAGATGCACTTCCAATGCTGCCACCAACTCTTGAGCTGAAACCAAAGGAGGAAAACCCCTTCATCATTCCCAAACACCAAATCCCATACCAACAGGAATCTTCAAGGAATGAGTTTGGTCTTGTCACTTCTGATTCCTTACTTAACCCTTCCCAGAAGAGCACCACAACCTTAACAGACAGGGAAACTGATTCCCATCATTCCCTCAGGCATTTCATCGACGACTGGCCCAAAACCCAGACCCACCACCGCTCTGCCTTGTCGTCGTGGCCGGAGTCGGAGAGGACCGAGCTCTCCATTTCCATCCCCATGACAACAACCTCCAATGACTTCATGTCGTCCACCTCCTCTCCCACCAATGACAAGCTCACTCTCTCACCCCTGCGTCTATCAAGGGAACTAGACCCGATTCAAATGGGTTTGGGAGTGGGAAACAATGCTTTAAGTGATTCATCAAACTCATCAAGGCAAGCTAACTGGATTCCAATCACTTGGGAGAGTTCAATGGGTGGTCCTCTTGGAGAAGTTCTGAATCTCAGCACTAACAACAACAATGGAAGTGATAATAATCAATGTGGCAAGAACAACAATTCGTCCTCAGCACTTAACCTCATGAGTGATGGGTGGGATAATACTAATAGCCCTCCATTAGGGTCTTCTCCAACTGGGGTTCTTCAGAAGACAGCCTTTGGATCTTTATCAAATAGCAGTGCTGGGAGCAGCCCAAGGGCAGAGAATAAAACACAAGAAGGTTCAAGCTTGTGCAATGATCTTCTAATGCCTGCATTGTAA 1719 0.4852 MDLGAVGLDGLVGVGGSIGCSDGETKHKWYGSGLLKQERSGGGNTNNEDDDEYWRSNKVAKTSINGERNSSSSLLRSNASLFSDVGGNNQQQQQMLSFSSPKSDTFPYHYLPLSRNTGCHSWGSNSMHGNGNGNGIGMRGAFTPSQWMELEQQALIYKYITANVPVPSHLLIPIKKALHSAGFSHFFRPSAVGWAGFHLGFSNSTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGHNGHALTGTTTSTTTKNVVPGNTPPPYSSPPNTISRMFMTTTTTTNNKESNGSERIPEAEDALPMLPPTLELKPKEENPFIIPKHQIPYQQESSRNEFGLVTSDSLLNPSQKSTTTLTDRETDSHHSLRHFIDDWPKTQTHHRSALSSWPESERTELSISIPMTTTSNDFMSSTSSPTNDKLTLSPLRLSRELDPIQMGLGVGNNALSDSSNSSRQANWIPITWESSMGGPLGEVLNLSTNNNNGSDNNQCGKNNNSSSALNLMSDGWDNTNSPPLGSSPTGVLQKTAFGSLSNSSAGSSPRAENKTQEGSSLCNDLLMPAL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03480 572 SMART QLQ_2 140 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aip07g03480 572 MobiDBLite consensus disorder prediction 483 564 - -
Aip07g03480 572 MobiDBLite consensus disorder prediction 34 54 - -
Aip07g03480 572 ProSiteProfiles QLQ domain profile. 141 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aip07g03480 572 MobiDBLite consensus disorder prediction 354 374 - -
Aip07g03480 572 MobiDBLite consensus disorder prediction 254 272 - -
Aip07g03480 572 MobiDBLite consensus disorder prediction 483 572 - -
Aip07g03480 572 Pfam WRC 207 249 IPR014977 -
Aip07g03480 572 PANTHER GROWTH-REGULATING FACTOR 9 21 559 - -
Aip07g03480 572 Pfam QLQ 141 174 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aip07g03480 572 ProSiteProfiles WRC domain profile. 206 250 IPR014977 -
Aip07g03480 572 PANTHER - 21 559 IPR031137 GO:0005634|GO:0006351|GO:0032502
Aip07g03480 572 MobiDBLite consensus disorder prediction 240 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03480 Aip-Chr7 124737443 124740307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03480 31 540 GRF Transcription Factor Family AT2G22840 42.463 1.92e-96 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Aip07g03480 WRC 5.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03480 - - aprc:113865097 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03480 07 124737443 124740307 Aip07g03480 07 124737443 124740307 ECH