Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03477 ATGAGTAGTGATGTTGAAAATGCCATGAGGCTTCAACAGGAAGAGAAAAAGGGCATTCTGTTGGGTTTGGGGACAAGTGGTTCAGAAATGGCAAGTTCTAATTCTGAGCCTTCAAATGTAGCTAATCCCTTTCTTGCTTCCTCTGCTTGGGATCCTCTTACTCCTTTAACTCAACTTCAAACTACTAATACTACTACTCTTGTTGGAGACCCTTCTACTTCAATACCAATACCAATGGTTTCTCATCATAATAATGAATTCTCCAACTCATTGTTGTACACTCTTGTTTTGGAAAACCAGCAAGCTCCTCACATTGTTCAATACATGTCTAGAGATATGGTTCCAAACCCCAAGGTTCAGGTTCCTATATCCTATGGAAGTGGGAGCTTCTCTGAAATGGTTGGCTCCTTTCTCCAATCTCCAAACAGTGAGCATTCACAGGGAGAAGGAGAAGGAGAAGATTCAGGATCAGCACCTAGTGGAAATAGAAGAAGAAAGAGAGGCCATGAACATAACAAGAATGCTGAAGATTGTTCTGGGAAGAGCTCTGATGGTAGAAAAGATCAAGATGATCAGAAGAAAGCAAAAGTGGAAGAAAATAAAGACAAAAGTGCTCAAAGTGGAGAAGCACCTAAAGAGAATTTCATTCATGTGAGAGCAAGAAGAGGCCAAGCTACTAACAGTCACAGCCTTGCAGAAAGGGTAAGGAGAGAAAAGATTAGTGAGCGAATGAGGTTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACTGGTAAAGCAGTGATGCTTGATGAGATTATAAACTATGTGCAATCATTGCAACAGCAGGTTGAGTTTTTGTCCATGAAACTTGCCACTGTGAACCCAGAGCTGAATTTGGACCTAGAGCGGATTCTCTCAAAAGATATTCTGCAATCACGAATTGGTGGATATAGTGGTGGTATAAGCTGCTCTCAAGCATTCCCTAGTTCCAGCTTCCAAGGAACACTAGTGCCCATGCCTACCACTTCAAATCAACTCCCTCCCTTGCCTCAGAGTGTGTTGGACCATGAATTCCAAAACTTGTATGGAATGAGCTATGATTCTAGTACAGCTCTTGGGAACATGGGGCACAATGGAGGATCCAAATCAGAGTTATAG 1143 0.4199 MSSDVENAMRLQQEEKKGILLGLGTSGSEMASSNSEPSNVANPFLASSAWDPLTPLTQLQTTNTTTLVGDPSTSIPIPMVSHHNNEFSNSLLYTLVLENQQAPHIVQYMSRDMVPNPKVQVPISYGSGSFSEMVGSFLQSPNSEHSQGEGEGEDSGSAPSGNRRRKRGHEHNKNAEDCSGKSSDGRKDQDDQKKAKVEENKDKSAQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNLDLERILSKDILQSRIGGYSGGISCSQAFPSSSFQGTLVPMPTTSNQLPPLPQSVLDHEFQNLYGMSYDSSTALGNMGHNGGSKSEL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03477 380 MobiDBLite consensus disorder prediction 170 219 - -
Aip07g03477 380 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 150 380 - -
Aip07g03477 380 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 32 144 - -
Aip07g03477 380 MobiDBLite consensus disorder prediction 134 234 - -
Aip07g03477 380 CDD bHLH_AtBPE_like 214 299 - -
Aip07g03477 380 Gene3D - 221 296 IPR036638 GO:0046983
Aip07g03477 380 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 224 274 IPR011598 GO:0046983
Aip07g03477 380 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 150 380 IPR024097 GO:0006355
Aip07g03477 380 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 32 144 IPR024097 GO:0006355
Aip07g03477 380 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 222 291 IPR036638 GO:0046983
Aip07g03477 380 SMART finulus 230 280 IPR011598 GO:0046983
Aip07g03477 380 Pfam Helix-loop-helix DNA-binding domain 227 275 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03477 Aip-Chr7 124660117 124662690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03477 41 380 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 45.682 1.17e-75 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip07g03477 HLH 3.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03477 - - adu:107461155 674.085