Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03473 ATGAGGGATGTCAAAGAAGGATCATTCACAAGGATATCAAGGTTTCTAATATTCTTCTCTTTGAGACTTTTGAGCCTCAGGTCGAACATCAAAAATCATCACTATACATCTGATTTTGGCCTAGCAAAGTGGTTACCTGACCAATGGACTCACCATACTGTTTCCAAAGTAGAAGGCACATTCAGGTACCTTTCCCCTAAATTCTTCATGCATGGAATAGTAGATGAGAAAACTGATGTATATGCTTATGGTGTGTTATTATTGGAGCTAATCACTGGAAGACAAGCTTTGGATATCTCACAAAAATTTTTTATCATGTGGGCAGGTTATGCTACCTTGGCCATAGGAACTGAGTGGATTTTTCGCCCCAAGCAAGAAGTGATCTCTCCGGTGCTTTGTAGTTGCGATGTTCTTCTTTTGTTGTTAACAGGGCATGAAGTATATAAGAGGACATGTATTGCAGCACCAACACATATAAAATGA 483 0.3913 MRDVKEGSFTRISRFLIFFSLRLLSLRSNIKNHHYTSDFGLAKWLPDQWTHHTVSKVEGTFRYLSPKFFMHGIVDEKTDVYAYGVLLLELITGRQALDISQKFFIMWAGYATLAIGTEWIFRPKQEVISPVLCSCDVLLLLLTGHEVYKRTCIAAPTHIK 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03473 160 Gene3D Transferase(Phosphotransferase) domain 1 16 133 - -
Aip07g03473 160 Pfam Protein kinase domain 37 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03473 160 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03473 160 PANTHER OS08G0249100 PROTEIN 36 108 - -
Aip07g03473 160 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 36 108 - -
Aip07g03473 160 SUPERFAMILY Protein kinase-like (PK-like) 35 98 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03473 Aip-Chr7 124623791 124625291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03473 37 127 Receptor kinase-like Gene Family AT4G02010 41.758 7.83e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aip07g03473 Pkinase 1.4e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03473 - - aip:110271812 182.185