Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03463 ATGATGATGGCCTTCTCTAATAATAATGACCAAGAACTTGGACTTGGTCTTGGTCTTAGTCTTGTTCATGGTGAAAACTGTAGGCAGAAGAAGAAGGAGGAGGAGGAGGGTCCATGCAGCAATATTAAGGCATACCCATCTCTTACTTTAGGACCAGAACAGGATTCTAGATCTTCTCAAAGCGCAGGTGTTTCTTCATTTTCCAACTCATCGTCTAGCATCAAGAGGGAGAGAGACGAAGAATTCTTGCTGGACTTAGACGAAGAAGAAAACAAGAAGAATGGTAACCCCAGAAAGAAACTTAGGCTCACCAAACAACAATCTGCACTCTTAGAGGATAGCTTCATACACCATTCTACTCTGAATCCGAAGCAAAAGCAAGAGTTGGCAAAGAAGCTCAATCTGAGAGCGAGGCAAGTGGAGGTGTGGTTTCAGAACAGGAGAGCAAGGTAG 453 0.4371 MMMAFSNNNDQELGLGLGLSLVHGENCRQKKKEEEEGPCSNIKAYPSLTLGPEQDSRSSQSAGVSSFSNSSSSIKRERDEEFLLDLDEEENKKNGNPRKKLRLTKQQSALLEDSFIHHSTLNPKQKQELAKKLNLRARQVEVWFQNRRAR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03463 150 MobiDBLite consensus disorder prediction 73 97 - -
Aip07g03463 150 SUPERFAMILY Homeodomain-like 90 150 IPR009057 -
Aip07g03463 150 SMART HOX_1 96 150 IPR001356 GO:0003677
Aip07g03463 150 MobiDBLite consensus disorder prediction 25 39 - -
Aip07g03463 150 MobiDBLite consensus disorder prediction 51 72 - -
Aip07g03463 150 CDD homeodomain 97 150 IPR001356 GO:0003677
Aip07g03463 150 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 59 150 - -
Aip07g03463 150 MobiDBLite consensus disorder prediction 25 102 - -
Aip07g03463 150 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 3 54 - -
Aip07g03463 150 Pfam Homeodomain 98 150 IPR001356 GO:0003677
Aip07g03463 150 PANTHER - 3 54 - -
Aip07g03463 150 Gene3D - 103 150 - -
Aip07g03463 150 PANTHER - 59 150 - -
Aip07g03463 150 ProSiteProfiles 'Homeobox' domain profile. 94 150 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03463 Aip-Chr7 124500335 124501360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03463 44 150 Homeobox Transcription Factor Family AT5G06710 53.097 2.40e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Aip07g03463 Homeodomain 1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03463 K09338 - gmx:100790927 122.094