Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03453 ATGGGTATCTGCATATCCGCTGAATCTTCAGAGATTCATCACGAATCATCTAACTTAGCTACTGAAGAGAATGTAACAGTGTATGAATCTAGCAAGAATGTTAATTTAAGTAAGATTCACAGACTTTCTTCTATTCACTCTAAAAAGGGTAGCAAAGGACTTAACCAAGATGCTGCCACTCTTTGCCAGGGTTATGGAATGGAGGATGCAGCATTTTGCGGTGTTTTTGATGGGCACGGAAGGAATGGTCGCATAGTGAGCCAAATAGTAAACAAGCGTTTGTCTTCACTCATTCTGGACCAAAAGAATATGATAGCTCATGCCAAGATTGATAACAATACCATATTGGAAGATGATGACTCGTGCACAAACAAGAATTTTCAAGAGTGGAAAGAAGCTATTCTTTGTGCTTTCAGGGTGATGGACAAGGAGGTGAATCAACTAGAGAATCTAGATTTCTCTTGCAGTGGAACTACAGCTATAGTTGCTATAAGACAGAGTGAAGATCTTATCATGGCTAACCTTGGTGACTCAAGAGCTGTCTTGGGGACAATTTGTGACGGTGAAATCATTCCCATTCAACTGACCACAGATATGAAGCCTGGATTACCTCGTGAAGCAGATAGAATAAGAAGTTGTAATGGTCGTGTATTTGCTCTACATGAGGAACCACACATCCAAAGAGTGTGGTTACCCAATGAGAACTCCCCAGGCCTAGCCATGTCTCGTGCTTTTGGAGATTTCATTCTTAAGGACCACGGTATCATTGCTATTCCGGAGATTTCGTTTCGCCCTCTAACATCAAGTGACCAATTTGTTGTGCTTGCAAGTGATGGGGTATGTGTTGTGTGA 852 0.4155 MGICISAESSEIHHESSNLATEENVTVYESSKNVNLSKIHRLSSIHSKKGSKGLNQDAATLCQGYGMEDAAFCGVFDGHGRNGRIVSQIVNKRLSSLILDQKNMIAHAKIDNNTILEDDDSCTNKNFQEWKEAILCAFRVMDKEVNQLENLDFSCSGTTAIVAIRQSEDLIMANLGDSRAVLGTICDGEIIPIQLTTDMKPGLPREADRIRSCNGRVFALHEEPHIQRVWLPNENSPGLAMSRAFGDFILKDHGIIAIPEISFRPLTSSDQFVVLASDGVCVV 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03453 283 CDD PP2Cc 41 280 IPR001932 -
Aip07g03453 283 SMART PP2C_4 32 283 IPR001932 -
Aip07g03453 283 SUPERFAMILY PP2C-like 35 281 IPR036457 -
Aip07g03453 283 ProSiteProfiles PPM-type phosphatase domain profile. 42 283 IPR001932 -
Aip07g03453 283 PANTHER ALPHABET, ISOFORM E-RELATED 1 280 - -
Aip07g03453 283 Gene3D - 23 283 IPR036457 -
Aip07g03453 283 Pfam Protein phosphatase 2C 64 280 IPR001932 -
Aip07g03453 283 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03453 Aip-Chr7 124339041 124340922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03453 1 280 PP2C-type Phosphatase Gene Family AT5G26010 51.064 3.93e-91 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03453 - - gmx:100795893 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03453 07 124339041 124340922 Aip07g03453 07 124339041 124340922 ECH
Aip06g03623 06 133629873 133633386 Aip07g03453 07 124339041 124340922 PCT