Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03441 ATGGCAAGGAAATGCACGTATTGTGGGAATTCTGGTCACAATTCAAGGACTTGCAACCACAGTTTCAGTAGTACCACAGGGGGGAGTAGTGGAATAAAGCTCTTTGGGGTACAACTTGATGATAATCAATATTCTTCTTCTTCATGCATGGACTACCTGCTATCCTTATCTGCTGCTGCTTCTTTATCATCATCGTCGCTTGTAGGTGCAAATAAAAATTCACATGAAATATCTTATTCTTACTTAACCGCCGGTGCCAGCAGTAGTGGTCTTATGTCAACGATCAAAGACAATAACAAAGGATTGGCATGGAGTGAGGAGGAGCACCGTATATTCCTAGAGGGGTTGGAGAAGCTGGGGAAGGGTAACTGGAGAGGCATATCCAGATGTTTTGTGAGAACAAGAACGCCCACTCAAGTGGCCAGCCATGCACAAAAGTATTTTCTCCGGCGGAACACTTTCAGATCAAGAAAACACCGCCTCACCCTAGCAAATGAGGGCACTAGGAATAGCGATGCCGTTGTTCTATCTCACTGGCTTGCCTCTGCAACTTCAACAAATTGCACCTCAATCCAAAGCGCAGCAGCTCCTGATTTAGAATTGAAACTTGCAACTCCCTCTCCCTCCCTCTAA 633 0.4534 MARKCTYCGNSGHNSRTCNHSFSSTTGGSSGIKLFGVQLDDNQYSSSSCMDYLLSLSAAASLSSSSLVGANKNSHEISYSYLTAGASSSGLMSTIKDNNKGLAWSEEEHRIFLEGLEKLGKGNWRGISRCFVRTRTPTQVASHAQKYFLRRNTFRSRKHRLTLANEGTRNSDAVVLSHWLASATSTNCTSIQSAAAPDLELKLATPSPSL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03441 210 ProSiteProfiles Myb-like domain profile. 96 148 IPR001005 -
Aip07g03441 210 Gene3D - 104 152 - -
Aip07g03441 210 Pfam Myb-like DNA-binding domain 103 148 IPR001005 -
Aip07g03441 210 SUPERFAMILY Homeodomain-like 99 152 IPR009057 -
Aip07g03441 210 ProSiteProfiles SANT domain profile. 104 152 IPR017884 -
Aip07g03441 210 CDD SANT 103 148 IPR001005 -
Aip07g03441 210 SMART sant 100 150 IPR001005 -
Aip07g03441 210 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 165 - -
Aip07g03441 210 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 99 150 IPR006447 GO:0003677
Aip07g03441 210 PANTHER TRANSCRIPTION FACTOR KUA1 1 165 - -
Aip07g03441 210 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Aip07g03441 210 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 152 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03441 Aip-Chr7 124250181 124251175 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip07g03441 Myb_DNA-binding 6.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03441 - - gmx:100806176 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03441 07 124250181 124251175 Aip07g03441 07 124250181 124251175 ECH