Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03440 ATGAAAGAGAGAGAAAAGATTCGTGTAAACAATGTATCCAAGTATGTCCTCAGTGCAGCAAAGAACCCGGAATTCGCACAAAAACTACACACAGTTTTGCTAGAGAGTGGAGCCCTCCCCCCACATGATCTCTTTTCAGGTGTAAATCCACAAGATATGGGTGAAGATAAAACATGTGAAGAATTTGTCAGGGATATCATTCAAGATGATCCAACTAGGTTGTCATTAAGCTACAACAAATCTCTCATACCCTATCAAATGAAGCACACTGCCCATGATACTAGGTCAGAACAGCAGAAAGAATTTTACATAGATAGATATGATAATTCCACACAGTGTGATTGTGAATGTGATAATGCGGGGAAGGGGTCTGTGATGGTTTGTGACAATAGAGTTGATGGGTTAGAGAAATCTCATTACTTATGTAAAGAGCAATGTGTCCAATCTGACTTGCCCAAGACAGCTGTTTCTTGTGAAACACGTGATAGATTTGATGTTTCCCATGATGGGGATGACAAAAATGGTTATAATGAGGTTGGTGTAGCTTCAAATGACGTTGGATTTTGTAAAGACTCAGCCATTCAGATAAATAAGGCACCCTGTATAGACTCAGCAGAGTGTATCACATATGATCATAAGAATGACAGAGTTGACCCAGTCTTGAGGGAGAGGAAAGAATGGGAAATTCAATGGGAGGATCTTCGTATTGGTCAACGTATTGGTATCGGTTCGTGTGGTGAGGTTTTCCATGCTGATTGCAACGGTTCGGAAGTTGCTGTGAAGAAGTTTCTAACACAAGATTTTTCTAGTGATGCGGTGGCTCAGTTCAAATCTGAAGTTGAGATCATGTTAAGACTGCGGCATCCCAATATTGTGCTCTTCATGGGAGCTATTACTCGTCCGCCACATCTATCCATCTTGACAGAGTTTCTTCCAAGAGGGAGTTTATATGGTCTATTGCGTAATCCTAAGTTTCAACTTAATGACAAGAGGCGGTTGCGTATGGCTGTTGATGTGGCTAAGGGAATGAACTACTTGCACACAAGTCATCCTCCCATTGTCCATAGAGATTTGAAGTCTCCGAATCTTCTTGTCTCCAAGCATTGGGTTCTTAAGGTCTGTGATTTTGGTCTATCGCGGATGAAGCACCATACATTTTTGTCATCAAAGTCCTATGCTGGAACGGCCGAGTGGATGGCACCAGAAGTCTTAAGAAACGAGCTTGCCAATGAAAAGTGTGATATATATAGTTTTGGAGTAATCTTGTGGGAGTTGGCTACGACAATGATCCCGTGGCAAGGTTTGAACCAAATGCAGGTTGTTGGAGCTGTTGGATTCCAAAACAGGCGCCTTGAAATTCCAGATGATGTTGATCCAGAAGTAGAACAGATAATACGTGATTGTTGGCAAATGGATCCACAGTTACGGCCATCATTCTCCGAGTTATTATCTCGTCTCTGCCAACTTCAACATCTTGTTGTCGTTAAAGGTGTAAAACGAGCTCCACACATCAAATGA 1518 0.4183 MKEREKIRVNNVSKYVLSAAKNPEFAQKLHTVLLESGALPPHDLFSGVNPQDMGEDKTCEEFVRDIIQDDPTRLSLSYNKSLIPYQMKHTAHDTRSEQQKEFYIDRYDNSTQCDCECDNAGKGSVMVCDNRVDGLEKSHYLCKEQCVQSDLPKTAVSCETRDRFDVSHDGDDKNGYNEVGVASNDVGFCKDSAIQINKAPCIDSAECITYDHKNDRVDPVLRERKEWEIQWEDLRIGQRIGIGSCGEVFHADCNGSEVAVKKFLTQDFSSDAVAQFKSEVEIMLRLRHPNIVLFMGAITRPPHLSILTEFLPRGSLYGLLRNPKFQLNDKRRLRMAVDVAKGMNYLHTSHPPIVHRDLKSPNLLVSKHWVLKVCDFGLSRMKHHTFLSSKSYAGTAEWMAPEVLRNELANEKCDIYSFGVILWELATTMIPWQGLNQMQVVGAVGFQNRRLEIPDDVDPEVEQIIRDCWQMDPQLRPSFSELLSRLCQLQHLVVVKGVKRAPHIK 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03440 505 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 154 496 - -
Aip07g03440 505 Gene3D Phosphorylase Kinase; domain 1 227 311 - -
Aip07g03440 505 ProSiteProfiles Protein kinase domain profile. 234 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03440 505 SMART serkin_6 234 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03440 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Aip07g03440 505 SUPERFAMILY Protein kinase-like (PK-like) 219 486 IPR011009 -
Aip07g03440 505 PANTHER SERINE-THREONINE PROTEIN KINASE 154 496 - -
Aip07g03440 505 CDD STKc_MAP3K-like 240 486 - -
Aip07g03440 505 Pfam Protein tyrosine and serine/threonine kinase 234 486 IPR001245 GO:0004672|GO:0006468
Aip07g03440 505 Gene3D Transferase(Phosphotransferase) domain 1 313 496 - -
Aip07g03440 505 PRINTS Tyrosine kinase catalytic domain signature 308 321 IPR001245 GO:0004672|GO:0006468
Aip07g03440 505 PRINTS Tyrosine kinase catalytic domain signature 413 435 IPR001245 GO:0004672|GO:0006468
Aip07g03440 505 PRINTS Tyrosine kinase catalytic domain signature 394 404 IPR001245 GO:0004672|GO:0006468
Aip07g03440 505 PRINTS Tyrosine kinase catalytic domain signature 347 365 IPR001245 GO:0004672|GO:0006468
Aip07g03440 505 PRINTS Tyrosine kinase catalytic domain signature 457 479 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03440 Aip-Chr7 124242996 124248847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03440 5 492 MAP Kinase Kinase Kinase AT5G11850 54.601 2.69e-176 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aip07g03440 PK_Tyr_Ser-Thr 6.5e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03440 K04424 - gmx:100779137 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03440 07 124242996 124248847 Aip07g03440 07 124242996 124248847 ECH