LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip07g03433	ATGTCCCTCGGCCAATCGGAGTGTTCGGAGCAGACATCAACGGACGATCCTGTTTTTGAGGAGTTCATTCCAATCAAGAAAAGGGCTTCACCTGATTGCGATGAAGAAGATGATGAAGAATATTATGATGATGGTGAAGAGCAACATTCTCATAGAAACAAGATTCAAAAGGAGGATAGTACCAACAACAATAATAATAACAGCAGCTGCAGCACTGATAAGAAAAAATCTGACTGGCTCAGATCTGTTCAATTGTGGAACCCTGATCCCCAACCACCTAAAGAGGATGTGCCTAGAAAAGCGTCTGTTGTGGAAGTGAAGAGAAGCATTGGTGGTGCTTTTCAGCCATTTCACAGAGAGGAGAGCACTGTTGGAAAGGTTAATGCATCATCATCATCATTGCCAACTGCCAAAACGCCTTCTTCTCCGCCGGTGCCAGCAACAAGTTCCACAGGACCTGTATCGACCGGAGGCAATGCTGGAAGCGGCGGTAAAAGAGAGGAGAAAGGACAGGGTCAGAGGAAGCAGCGGCGGTGCTGGTCACAGGAACTACACAAACGGTTCCTTCATGCCCTTCAGCAGCTTGGAGGTGCAGATTCTTGCTTCTCTTCTCAAACCCCATTACAACTCACAACTCCTTCATCTCTCTCACTCACATTCTCCCTCGGTCAAAGAATGACGGAACCAGCTTCCAAACCCAACGGAAACGGCGCAATTAACGGAACCGCCGCAGCCCCCGCGGTTAACGGCAACCAAGGCCCAGTCAAATCCCAGCTCTACAACCCCAACCGCCAAGTCTATCGCCCACAGTCGCACTACCACCGCCGGCACCGCTCCGGTCGCAGCATCTGCTGCTGCTGCTGCTTCTGGACCATCCTCATCATCCTCGCCGCCGCACTCCTCGCCGCAATCGTAGGCGCCGCACTCTACGTTCTTTACCGGCCACACCAGCCGCAATTCTCCATCACCAACCTCCGCATTGCGAGGATGAACCTAACAACCTCCACTGACTCGCCGTCACACCTGACCACACTCTTCAACCTCACTCTCATCGCAAAGAACCCTAACAACCACCTTGTGTTCTTCTACGATCCGTTCACCGTGACGGCGCTGTCAGATTCCGTTTTCATTGGGAACGGGTCGCTAACAGCGTTTGAGTCCGACAAGAACAACCAGACGAGCTTGAGGGCGGTGGTGTCGGGGTCGCAGGATCTGGACACGGAGTCGCTGAGCACGATGAGATCGGCGCTGAAGAAGAAGAAAGGGTTCCCGGTGGTGATTCAGATGGACACCAAGGTGAAGATGAGAATGGAGTGGCTCAAGAGCAAGAAGGTTGGCATCAGAGTCACCTGCGATGGGATCAGGGGCACCGTCCCCGCCGGCAAGTCGCCGGCTGTTGCTTCCGTCATCGACTCCCAGTGTAAGGTTGATCTCAGAATCAAGATCTGGAAGTTCTCTTTTTAG	1464	0.5253	MSLGQSECSEQTSTDDPVFEEFIPIKKRASPDCDEEDDEEYYDDGEEQHSHRNKIQKEDSTNNNNNNSSCSTDKKKSDWLRSVQLWNPDPQPPKEDVPRKASVVEVKRSIGGAFQPFHREESTVGKVNASSSSLPTAKTPSSPPVPATSSTGPVSTGGNAGSGGKREEKGQGQRKQRRCWSQELHKRFLHALQQLGGADSCFSSQTPLQLTTPSSLSLTFSLGQRMTEPASKPNGNGAINGTAAAPAVNGNQGPVKSQLYNPNRQVYRPQSHYHRRHRSGRSICCCCCFWTILIILAAALLAAIVGAALYVLYRPHQPQFSITNLRIARMNLTTSTDSPSHLTTLFNLTLIAKNPNNHLVFFYDPFTVTALSDSVFIGNGSLTAFESDKNNQTSLRAVVSGSQDLDTESLSTMRSALKKKKGFPVVIQMDTKVKMRMEWLKSKKVGIRVTCDGIRGTVPAGKSPAVASVIDSQCKVDLRIKIWKFSF	487

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip07g03433	487	MobiDBLite	consensus disorder prediction	1	179	-	-
	Aip07g03433	487	MobiDBLite	consensus disorder prediction	240	259	-	-
	Aip07g03433	487	MobiDBLite	consensus disorder prediction	59	73	-	-
	Aip07g03433	487	MobiDBLite	consensus disorder prediction	1	16	-	-
	Aip07g03433	487	Gene3D	-	174	224	-	-
	Aip07g03433	487	PANTHER	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	229	486	-	-
	Aip07g03433	487	PANTHER	HARPIN-INDUCED PROTEIN	229	486	-	-
	Aip07g03433	487	MobiDBLite	consensus disorder prediction	124	158	-	-
	Aip07g03433	487	MobiDBLite	consensus disorder prediction	245	259	-	-

Showing 1 to 9 of 9 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip07g03433	Aip-Chr7	124162878	124165528	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip07g03433	4	198	G2-like Transcription Factor Family	AT1G25550	47.264	4.16e-35	130

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip07g03433	-		-	gmx:100786652	414.461

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