Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03430 ATGACATCTGCATCAAGTGAGATAAGTGCCTCTACTTCGCTACCAATAAAGAAGAAGAGAAATCTCCCAGGCCATCCAGACCCTGATGCGGAAGTGATAGCCTTATCACCAAAGAGCCTGTTGGCAACAAACCGGTTCGTTTGTGATGTTTGCAACAAAGGGTTTCAAAGAGACCAGAATCTGCAGCTTCATAGAAGGGGCCACAATCTGCCATGGAAGCTAAAGCAAAGAAGTAACAAAGAGATAATAAGGAAGAAGGTGTACGTTTGTCCAGAGCCAACTTGCGTTCACCATGACCCCTCAAGGGCACTCGGCGACCTCACCGGAATCAAGAAGCACTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGTGACAGGTGCTCCAAGCGCTACGCCGTTCATTCAGATTGGAAAGCTCACTCCAAAATCTGTGGCACCCGAGAGTACAAATGTGACTGCGGAACCATTTTTTCTAGGAGGGATAGTTTCATCGCTCACAGGGCATTCTGTGATGCTCTAGCACAAGAGAGTACGAAAGCAATCACAACCTTGTTCAACCCATCATCATCAGTGAAGAAGGAATTGCAAGAAGTTAATTTAAGATCAGAAAATCGTCCATTATGGTTGTCTTACTCAACCTCGGTTGGAGGAGAAGGAAGCCATGGAAGAGTAGTTCATAACAATAATAATAATAATAATAATAATAATTCAACATTATTATTCTCCTCGCCGCCGCCGCCGTCGACGTCGCTGCTTTCTACAATGATCCACCATGAAAACCCTAACCCTAATATTACTATGTTGCCACCTAATAATAATGCTTTATTATTTGAAGGCATGGCTTCATCTTATTCTTCTTCTCATAATCTCATGTCTGCTACTGCATTGTTACAAAAGGCATCAGAAATAGGTGCAACGGTGTCGCTGGGTAAACCCTATCTACAAGCTCATCATCACCATCGGGGTCACGTGCCTGAAAGCACCACCACGGGGTATGGCACCTTGTCGTCAATGGCCACATCTTCATCATCTGTTTCTGGATTATTGGACATGGATTCACGTGAAGAGATAGGGACAGGGATGATGTTTGCTCGTCATCATCATCATGGCTTCTTGGCATCTTATGAGAGTTACAAAGCTGATGAGCACACAAAAGAAGCTTCTCTTCTTGTTCATAATGATATGATGGATGGTACTAGTACCTTTGAGGAGGCTCTAATGAGAGGAATCATGAATCATCCTACGAGAGAAGATGCTGATAATAATAGTAATAACTTTGATGAACTTGTTTCAAGATCCGCGGGATCCCGCGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGTGTCAACGATGAGACTAGAGATTTTTTGGGGATTGGGGTGTTTTCTCAGAGAGATATTTTCAATATATCTGGTCTTCATCATCATCATTTGGATTCTTCTTCGTATGGCAACCAAAATCAAAAGCAACCACCCTGGCAAGGGTAA 1491 0.4433 MTSASSEISASTSLPIKKKRNLPGHPDPDAEVIALSPKSLLATNRFVCDVCNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEIIRKKVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDRCSKRYAVHSDWKAHSKICGTREYKCDCGTIFSRRDSFIAHRAFCDALAQESTKAITTLFNPSSSVKKELQEVNLRSENRPLWLSYSTSVGGEGSHGRVVHNNNNNNNNNNSTLLFSSPPPPSTSLLSTMIHHENPNPNITMLPPNNNALLFEGMASSYSSSHNLMSATALLQKASEIGATVSLGKPYLQAHHHHRGHVPESTTTGYGTLSSMATSSSSVSGLLDMDSREEIGTGMMFARHHHHGFLASYESYKADEHTKEASLLVHNDMMDGTSTFEEALMRGIMNHPTREDADNNSNNFDELVSRSAGSRGGGGGGGGGGGVNDETRDFLGIGVFSQRDIFNISGLHHHHLDSSSYGNQNQKQPPWQG 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03430 496 MobiDBLite consensus disorder prediction 1 30 - -
Aip07g03430 496 Gene3D Classic Zinc Finger 101 181 - -
Aip07g03430 496 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 8 474 - -
Aip07g03430 496 SMART c2h2final6 88 118 IPR013087 -
Aip07g03430 496 SMART c2h2final6 123 143 IPR013087 -
Aip07g03430 496 SMART c2h2final6 46 68 IPR013087 -
Aip07g03430 496 MobiDBLite consensus disorder prediction 415 450 - -
Aip07g03430 496 MobiDBLite consensus disorder prediction 1 16 - -
Aip07g03430 496 ProSitePatterns Zinc finger C2H2 type domain signature. 48 68 IPR013087 -
Aip07g03430 496 Gene3D Classic Zinc Finger 46 90 - -
Aip07g03430 496 ProSiteProfiles Zinc finger C2H2 type domain profile. 46 68 IPR013087 -
Aip07g03430 496 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 8 474 - -
Aip07g03430 496 SUPERFAMILY beta-beta-alpha zinc fingers 45 143 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03430 Aip-Chr7 124121750 124124230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03430 17 181 IDZ Gene Family AT3G50700 85.455 1.79e-109 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip07g03430 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03430 K25870 - qsu:112016383 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03430 07 124121750 124124230 Aip07g03430 07 124121750 124124230 ECH