Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03428 ATGTTAAGAGGTGGAAACTCTCATGACAGTACTATCTTCTCCGGTGCATCTGCCAATTTTGTCGCTGGTGCTGCGGCCGGTTGTACAGCACTTATCTTAGTCTACCCCCTTGACATTGCACATACCCGCCTTGCTGCTGACATCGGAAGGAAAGAGGCACGTCAGTTTCGTGGCATCTACCATTTCCTGGCTACCATATTCGAAAAGGACGGGATCCGGGGGATTTACAGGGGCCTTCCTGCATCCCTACAAGGGATGGTGGTCCACAGGGGCCTTTACTTTGGAGGCTTTGATACAATAAAAGAGATTCTATCCGAAGAAGAATCCAAGCCGGAGATTGCTCTGTGGAAGCGCTGGTTGGTAGCTCAGGCAGTCACAACCTCGGCAGGGTTGATATCTTACCCATTAGACACGGTCCGCAGGAGGATGATGATGCAGTCGGGGATGGAACGGCCGGTGTACCACAGCACCCTGGATTGCTGGAGGAAGATCTATAGGACAGAGGGGTTGGCTTCATTCTACCGCGGCACGGTTTCAAATGTGTTTAGAAGCACAGGTGCTGCAGCTATCTTAGTCTTGTATGATGAGGTTAAGAAATTCATGAATTGGGGGCGATTGTAA 621 0.5056 MLRGGNSHDSTIFSGASANFVAGAAAGCTALILVYPLDIAHTRLAADIGRKEARQFRGIYHFLATIFEKDGIRGIYRGLPASLQGMVVHRGLYFGGFDTIKEILSEEESKPEIALWKRWLVAQAVTTSAGLISYPLDTVRRRMMMQSGMERPVYHSTLDCWRKIYRTEGLASFYRGTVSNVFRSTGAAAILVLYDEVKKFMNWGRL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03428 206 ProSiteProfiles Solute carrier (Solcar) repeat profile. 117 200 IPR018108 -
Aip07g03428 206 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 103 IPR018108 -
Aip07g03428 206 PANTHER ADP,ATP CARRIER PROTEIN-RELATED 7 205 - -
Aip07g03428 206 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 7 205 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aip07g03428 206 PRINTS Mitochondrial carrier protein signature 29 47 IPR002067 GO:0055085
Aip07g03428 206 PRINTS Mitochondrial carrier protein signature 76 94 IPR002067 GO:0055085
Aip07g03428 206 PRINTS Mitochondrial carrier protein signature 122 144 IPR002067 GO:0055085
Aip07g03428 206 PRINTS Adenine nucleotide translocator signature 14 27 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aip07g03428 206 PRINTS Adenine nucleotide translocator signature 118 134 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aip07g03428 206 Pfam Mitochondrial carrier protein 17 106 IPR018108 -
Aip07g03428 206 Pfam Mitochondrial carrier protein 113 202 IPR018108 -
Aip07g03428 206 Gene3D Mitochondrial carrier domain 3 203 IPR023395 -
Aip07g03428 206 SUPERFAMILY Mitochondrial carrier 11 196 IPR023395 -
Aip07g03428 206 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03428 Aip-Chr7 124108728 124109348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03428 17 199 Antiporters AT5G17400 39.153 3.13e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03428 K05863 - gmx:100807764 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03428 07 124108728 124109348 Aip07g03428 07 124108728 124109348 ECH