Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03417 ATGTCTTCCACGTTCTATGATGGTAAAACACCGTTAGCACCAAACACGACGTTGGTGGCCGTGGACAAAGATAAGAACAGTTCCTACGCATTTCGTTGGGCGGTTAATCATCTAGACAACCCTCTCGTCCTTGCCGTCCATGTCAAACACAAAGACAACATTTGTAGCCTTCGTAACGATCTCGTTACTGTTTATGAACCCGATGAAGACGATGTAGCCAATGTGTTCGGCAACTTACGTGGACTATGTAATCGAAAAGCTGTGCAAGTAAAAGAAGCCGTAATCCATGAAAGCGATGTTGTGAGAGGAATTGTGGAATTTGCAAGCAAGAATTTCATACACACTATTGTGGTTGGTGCACCAGCCAACAAGGGTGCTTTCTCAAGAATATTGAGAGGGCATCAAACTGATGTGCCAACAGCATTGCTTAAATCAGCTCCAGATTTCAGTTCTGTATACGTGATTTCCAAATGGAAAATTGTGTCGGTTCGATCTGCAACACGTGCCATCCAACATACCCTTACCCCACCCAGAACTCCACCGCGGCTATGGCAATCACCACCCTCTACTCCTACTCCTTCCAGAATCCACCACTATCCACATAGTGAACCAGACATGGGAGGAGTAAGAGGAATAATCTCGTTCCGTGATAAGCCAATGAGTGCAGGAAATTCTCCATTAATGGGTAATACCTTTGAAGGAACACCTCCTCATCTACGACATTTCTCAATGGATGACTGTAGAGAAATATCAATGGATCACAACCAAACTACTAACTTCAGCTTCTCATCAGAATTCTCATCAGCCTCAATCTCTTCTTCTACTAGAGATATTGATGCAGAAATTAGAAGATTGAAGCAGGAACTGCAGCAAACTATAGACTTGTACAGCACAGCTTGCAAACAAGCCATCTCAGCCAAGAAAGAGGCTGAAATGATGCGGCATTTGAAAATGGAAGGGGAGAGAAGAGTTGAGGCGATTAGGATGTCTCAAGAGGCAGCTCTTGCCATTGCAGAAAGGGAGAAGGCAAGGGCCACGGCAGCATGGGAAATGGCAGAGGATGCGAAGAAGAGGGCTGAACTGGAAACACAGAGAAGAAGGGATGCAGAGTTGAAGGCGGCGAAAGAGGCAGAGGAGAAGGAGATGGCACTAACTGCTTTGGCTCACACCGATATGCGATGCAGAAGATACACCATGGAGGAGATTGAAGCAGCTACAGAGAAGTTCAACCCTTCAAGAAAAATTGGAGAAGGTGGATATGGTTCTGTCTATAAAGGTGATCTTGAAAATACCCCTGTTGCAATTAAGGTCTTAAATCCTGAAGCTGCTCAAGGAAGGAAACAGTTCCAACAAGAGGTTGAGGTACTAAGCTGCATTAGACATCCTAATATGGTTCTGCTCCTTGGTGCTTGTCCTGAATCTGGTTGCTTGGTGTATGAATACATGGACAATGGTACCTTAGAAGATAGATTGTTCCGGAAAGATAATTCACCACCTATGCCATGGAGGCTGCGGTTTAATATAGCTGCTGACATTGCAACTGCTCTCCTTTTCTTACACCAGGCGAAGCCGGAGCCGATTGTTCATCGTGATCTCAAACCAGCTAACATTCTTTTGGACAGGAATTATGTCACCAAAATCGCAGACATCGGTCTGGCAAGATTGGTTCCTCAATCTGTAGTGGACAATGTCACACAATATTACATGACCTCGGCTGCTGGAACATTCTGTTACATTGATCCTGAGTACCAACAAACTGGAATTTTGACCCCAAAATCGGATGTATATTCTTTGGGAGTAGTACTATTGCAGATAATCACAGCCAAACCTGCTATGGGACTTTCTCACCATGTTAGGAGGGCAATTGCAAAGGAAAAATTTGAAGATATGCTTGATCCTATGTTGTTTGATTGGCCAGTTGAGAAGGCTCTAGAATTTGCCAACTTAGCATTGGCCTGTTGTGAGCTCAGAAAGAAGGACAGGCCGAATCTCGCAACCGTTGTGTTGCCGGAACTTAATCGGTTAAGAGAATTTGGAAGATAG 2043 0.4449 MSSTFYDGKTPLAPNTTLVAVDKDKNSSYAFRWAVNHLDNPLVLAVHVKHKDNICSLRNDLVTVYEPDEDDVANVFGNLRGLCNRKAVQVKEAVIHESDVVRGIVEFASKNFIHTIVVGAPANKGAFSRILRGHQTDVPTALLKSAPDFSSVYVISKWKIVSVRSATRAIQHTLTPPRTPPRLWQSPPSTPTPSRIHHYPHSEPDMGGVRGIISFRDKPMSAGNSPLMGNTFEGTPPHLRHFSMDDCREISMDHNQTTNFSFSSEFSSASISSSTRDIDAEIRRLKQELQQTIDLYSTACKQAISAKKEAEMMRHLKMEGERRVEAIRMSQEAALAIAEREKARATAAWEMAEDAKKRAELETQRRRDAELKAAKEAEEKEMALTALAHTDMRCRRYTMEEIEAATEKFNPSRKIGEGGYGSVYKGDLENTPVAIKVLNPEAAQGRKQFQQEVEVLSCIRHPNMVLLLGACPESGCLVYEYMDNGTLEDRLFRKDNSPPMPWRLRFNIAADIATALLFLHQAKPEPIVHRDLKPANILLDRNYVTKIADIGLARLVPQSVVDNVTQYYMTSAAGTFCYIDPEYQQTGILTPKSDVYSLGVVLLQIITAKPAMGLSHHVRRAIAKEKFEDMLDPMLFDWPVEKALEFANLALACCELRKKDRPNLATVVLPELNRLREFGR 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03417 680 SMART serkin_6 409 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03417 680 ProSitePatterns Protein kinases ATP-binding region signature. 415 436 IPR017441 GO:0005524
Aip07g03417 680 Coils Coil 352 381 - -
Aip07g03417 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Aip07g03417 680 PANTHER OS02G0152300 PROTEIN 16 679 - -
Aip07g03417 680 CDD STKc_IRAK 415 675 - -
Aip07g03417 680 MobiDBLite consensus disorder prediction 173 203 - -
Aip07g03417 680 Gene3D HUPs 9 147 IPR014729 -
Aip07g03417 680 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 679 - -
Aip07g03417 680 Pfam Protein kinase domain 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03417 680 SUPERFAMILY Protein kinase-like (PK-like) 391 668 IPR011009 -
Aip07g03417 680 CDD STK_N 16 157 - -
Aip07g03417 680 Gene3D Transferase(Phosphotransferase) domain 1 482 678 - -
Aip07g03417 680 Pfam Universal stress protein family 18 135 IPR006016 -
Aip07g03417 680 Gene3D Phosphorylase Kinase; domain 1 376 481 - -
Aip07g03417 680 ProSiteProfiles Protein kinase domain profile. 409 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03417 680 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 15 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03417 Aip-Chr7 123939926 123943733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03417 92 680 Receptor kinase-like Gene Family AT5G12000 55.139 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Aip07g03417 Pkinase 2.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03417 - - adu:107461003 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03417 07 123939926 123943733 Aip07g03417 07 123939926 123943733 ECH
Aip06g03517 06 132403974 132410728 Aip07g03417 07 123939926 123943733 ECH