Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03414 ATGGAGGATCTCGTGGAAGAAGAGAAGGGAGGAGAGGAGGTGTTAGGTTCGAGCTTGACGATGGAGAAGGTAGCTGCAGCTAAGAAGTTCATAGAGAATCACTATAGGGCTCAGATGAAGAACATCCAAGAGAGGAAGGAGAGGCGTTGGGTTTTAGAAAGACAATTAGCTTCTTCAGATGTGCCAAATGAGGAACGTGTTAACTTAATCAAAGATTTAGAGAGGAAGGAGACTGAATATATGCGATTGAAAAGGCACAAGATTTGTGTTGACGATTTTGAGAATTTGACCATCATTGGAAGGGGGGCCTTTGGAGAGGTTAGACTGTGTCGGGAGAAGAAATCTGGAAACATTTATGCCATGAAAAAGCTGAAGAAATCTGAAATGCTGAAGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTACTAGCTGAAGTTGCTAGTCATTGCATTGTGAAACTTTACTACTCATTTCAGGATGCTGACTACTTGTATTTAATTATGGAGTACCTTCCCGGGGGTGATGTGATGACGCTATTGATGAGGGAAGACACGTTAAGTGAAGATGTTGCCAGATTTTACATTGCACAGAGTGTTCTAGCCATAGAGTCTATTCATAAACACAATTACATTCACAGGGATATTAAACCAGATAACCTTCTCCTGGATAAAAATGGACACATGAAGCTCTCAGATTTTGGCCTCTGTAAGCCTCTTGATTGTACTACCCTGTCTACACTGCATGAAAATCAAACTATGGATGATGAAAATGTGGCAGAGCCCATGGATATTGATGGATGTTTTCCTGATGCGGACAATCGGAGCAGCTGGAGAAGCCCACGTGAACAGCTTCAGCATTGGCAGATGAACAGGAGGAAGTTGGCATTTTCAACAGTGGGGACACCTGATTACATTGCTCCTGAAGTACTTTTGAAGAAGGGATATGGAATGGAATGTGACTGGTGGTCATTAGGAGCAATAATGTATGAAATGCTAGTTGGTTATCCTCCATTTTATGCTGATGACCCAATAACTACATGCAGAAAGATTGTTCATTGGAGAAATCATTTACGATTTCCAGAAGATGCACGCTTGACACTTGAAGCCAAAGACTTAATCTGCAGGCTGCTGTGTGATGTTGATCATAGGTTAGGTACTCAAGGGGCACAGGAAATCAAGGTTCATCCTTGGTTCAAGAATGTGGAGTGGGATAAACTATACCAAATGGAGGCAGCATTCAAACCTCAAGTCAATGGGGAGCTGGATACCCAAAACTTCATGAAGTTTGATGAGGTAGATCCACCAACAGGAGCAAGAACTGGATCTGGATCCTCCCGGAAGATGCTTTTGACTCCCAAAGATCTAAACTTTGTTGGGTATACTTACAAGAACTTTGATGCTATAAAAGAAGGGCTTAGGCAGTCTCTTGGTGATTCCATGCAAGATTATGCTTCTAAACGGGCAGCTGAGGAAACAGGTTTGCAAATGCTGGCAACAACAGGAGATCCTATGCTACCTTAA 1527 0.4263 MEDLVEEEKGGEEVLGSSLTMEKVAAAKKFIENHYRAQMKNIQERKERRWVLERQLASSDVPNEERVNLIKDLERKETEYMRLKRHKICVDDFENLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDADYLYLIMEYLPGGDVMTLLMREDTLSEDVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCTTLSTLHENQTMDDENVAEPMDIDGCFPDADNRSSWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYADDPITTCRKIVHWRNHLRFPEDARLTLEAKDLICRLLCDVDHRLGTQGAQEIKVHPWFKNVEWDKLYQMEAAFKPQVNGELDTQNFMKFDEVDPPTGARTGSGSSRKMLLTPKDLNFVGYTYKNFDAIKEGLRQSLGDSMQDYASKRAAEETGLQMLATTGDPMLP 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03414 508 Gene3D Transferase(Phosphotransferase) domain 1 299 418 - -
Aip07g03414 508 Gene3D Transferase(Phosphotransferase) domain 1 177 244 - -
Aip07g03414 508 Pfam Protein kinase C terminal domain 419 464 IPR017892 GO:0004674|GO:0005524|GO:0006468
Aip07g03414 508 SUPERFAMILY Protein kinase-like (PK-like) 76 443 IPR011009 -
Aip07g03414 508 ProSiteProfiles AGC-kinase C-terminal domain profile. 401 474 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aip07g03414 508 SMART serkin_6 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03414 508 CDD STKc_NDR_like 91 465 - -
Aip07g03414 508 Gene3D Phosphorylase Kinase; domain 1 419 429 - -
Aip07g03414 508 Gene3D Phosphorylase Kinase; domain 1 91 176 - -
Aip07g03414 508 ProSiteProfiles Protein kinase domain profile. 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03414 508 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 486 - -
Aip07g03414 508 SMART pkinase_C_6 401 466 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aip07g03414 508 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 13 486 - -
Aip07g03414 508 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Aip07g03414 508 Pfam Protein kinase domain 93 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03414 508 Pfam Protein kinase domain 292 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03414 508 Coils Coil 66 86 - -
Aip07g03414 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03414 Aip-Chr7 123874781 123880829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03414 1 507 AGC Kinase Gene Family AT4G33080 80.392 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Aip07g03414 Pkinase 8.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03414 K08790 - gmx:100815717 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03414 07 123874781 123880829 Aip07g03414 07 123874781 123880829 ECH
Aip06g03520 06 132453077 132460811 Aip07g03414 07 123874781 123880829 ECH