Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03412 ATGGAGGAGATGTCGACTACGGTTGCAGTGCCATTAACAGTAGGTAATTCGGTGTGTGATAAGCCAACCATAGCTACCCACATGGATGTATCTAGACTTAAGCTGATGACTGATACGGGGTTGTTAAGTAATTCTGTAACAGCGGTTTCTACTGAAACGTTTATAGGCTCTAATGAGGATCATAATGGTGGCAATCTTGAGGATGAAGTTGGTAGTACAACAGTCACACCATCAAAAAAGGGAAGTGAAGGAGAAATTCCTCTGGATGATATGATATCCCAGAATAAAAGCACTTTGGTTGGTGGTGATGAAGCTTCAACCCCAGAAATCGAGGAGGATGATACCTTATCATTGGAAGGTGATCCAATTATTGATAGCTCCTGTTCTCTTTCAGCAGCCAGTGAGAACAGTAGTATTTGTGGAGATGAGTTCATCAATTCGGAGGCCAATCCGGATTTAGGAACAAGAAGTTCCGTAGACATAGGGAAGAGCATGTGCACTGTTGATGCTGTTGCCAGGGCTGCTGATTTAGGGGAGTCCAATTATGAGGCAGATATTATGAGTGAACCCCTTAATGTAGCGGTGAGCCTTGAAGAGGCAGTAGTTGGATCTGTCACAAAGCCTACTACAGTTGTTCTTCATCAGCTACCTCTAGAAAAAGTGGTGGCTGGAACAGGTGGTCGAAGTGTTTTTGAATTGGACTGTACTCCGCTTTGGGGATTTATATCTTTGTGTGGAAAAAGACCCGAGATGGAAGACGCATTTGCAACAGTACCCCGATTCATGAAGATTCCTATTGAAATGCTAATTGGTGATAGGGTAATTGATGGACTGAATAAAAGTTTGAGTCAGCAAACAATTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAACTATTGTCGTGAGCGTATGCATTTGGCGTTGGCAGAGGAAATAGAATTAGTCAAGGAAGGTCTAATAGTTGGAAGTAGCAAGGATGATTGTCAAGACCAATGGAAAAAAGCTTTCACCAATTGCTTTTTGAAGGTTGATGCTGAAGTTGGGGGAAAAGTTAACAATGAACCTGTTGCACCGGAGACTGTCGGATCAACTGCAGTTGTTGCTGCTATCTGTTCATCTCATATCATTGTTTCAAACTGTGGTGATTCAAGAGCAGTCTTGTGCCGTGGCAAAGAGCCCATGGCTTTATCCGTTGACCATAAACCCAATCGAGATGATGAATATGCAAGAATTGAGGCAGCAGGAGGGAAGGTGATCCAGTGGAATGGTCATCGTGTATTTGGTGTCCTTGCAATGTCACGATCTATCGGTGATAGATATTTGAAGCCATGGATCATTCCGGAGCCGGAAGTTACGTTTCTTCCCCGGACGAAAGACGACGAATGCCTCATTCTGGCGAGTGATGGCCTGTGGGATGTCATGACGAATGAAGAGGTGTGCGACCTAGCTAGGAAGCGAATACTTCTCTGGCACAAGAAAAATGGCCTGACACTGCCACCAGAAAGGGGAGAGGGAGTTGATCCTGCAGCACAAGCGGCCGCAGAGTACCTATCGAGCCGCGCCTTACAGAAGGGAAGCAAAGATAACATCACAGTAATTGTGGTGGACTTAAAAGCTCAAAGAAAATTCAAGAGCAAGACATGA 1659 0.4467 MEEMSTTVAVPLTVGNSVCDKPTIATHMDVSRLKLMTDTGLLSNSVTAVSTETFIGSNEDHNGGNLEDEVGSTTVTPSKKGSEGEIPLDDMISQNKSTLVGGDEASTPEIEEDDTLSLEGDPIIDSSCSLSAASENSSICGDEFINSEANPDLGTRSSVDIGKSMCTVDAVARAADLGESNYEADIMSEPLNVAVSLEEAVVGSVTKPTTVVLHQLPLEKVVAGTGGRSVFELDCTPLWGFISLCGKRPEMEDAFATVPRFMKIPIEMLIGDRVIDGLNKSLSQQTIHFFGVYDGHGGSQVANYCRERMHLALAEEIELVKEGLIVGSSKDDCQDQWKKAFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVAAICSSHIIVSNCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRTKDDECLILASDGLWDVMTNEEVCDLARKRILLWHKKNGLTLPPERGEGVDPAAQAAAEYLSSRALQKGSKDNITVIVVDLKAQRKFKSKT 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03412 552 SUPERFAMILY PP2C-like 235 543 IPR036457 -
Aip07g03412 552 ProSitePatterns PPM-type phosphatase domain signature. 289 297 IPR000222 GO:0043169
Aip07g03412 552 PANTHER ALPHABET, ISOFORM E-RELATED 127 552 - -
Aip07g03412 552 Gene3D - 225 552 IPR036457 -
Aip07g03412 552 ProSiteProfiles PPM-type phosphatase domain profile. 238 542 IPR001932 -
Aip07g03412 552 SMART PP2C_4 228 540 IPR001932 -
Aip07g03412 552 CDD PP2Cc 243 542 IPR001932 -
Aip07g03412 552 MobiDBLite consensus disorder prediction 55 88 - -
Aip07g03412 552 Pfam Protein phosphatase 2C 271 535 IPR001932 -
Aip07g03412 552 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 127 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03412 Aip-Chr7 123845195 123848053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03412 1 552 PP2C-type Phosphatase Gene Family AT1G17550 48.246 5.75e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03412 K14497 - gmx:100803321 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03412 07 123845195 123848053 Aip07g03412 07 123845195 123848053 ECH