Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03407 ATGCATTATGAGATTAATGTTAGCAATCGATTAATTAAGATGAGTAGTGATAAGAATAAAAAAGCAGCAGATTCACCTGAAAACGGTGATTCCACCAACCAGTGGTTCTTTGAGCTCTCTGACTACTTGAAGCTGAATGATGATGATGATGATCAATGGCCAGATGATGATAATGTTCCACCACCACTACCAGAAGCAGAGCCATTATTTTTTCCCAATACTAATGAAGTTGGAGATTTTGGAGCAAGTGGCAGCGGCAGTAACCACCTTCAAGGGTCTTCTAATGCTCGAGAGGTTAGTGGAAGTGAGAAGAAAGATGTTAGGGAGAGAGTTGCATTCAAAACCAAGTCCGAGGTTGAAATCATAGACGATGGTTACAGGTGGAGGAAGTACGGAAAGAAAATGGTTAAGAACAGCCCAAACCCAAGAAACTACTATAGGTGTACAGTGGATGGATGTCGGGTAAAGAAGAGAGTTGAAAGAGACAGGGAAGATCCCACATATGTAATTACAACCTACGAAGGAAACCATACTCACCCAACATCTTAG 549 0.4135 MHYEINVSNRLIKMSSDKNKKAADSPENGDSTNQWFFELSDYLKLNDDDDDQWPDDDNVPPPLPEAEPLFFPNTNEVGDFGASGSGSNHLQGSSNAREVSGSEKKDVRERVAFKTKSEVEIIDDGYRWRKYGKKMVKNSPNPRNYYRCTVDGCRVKKRVERDREDPTYVITTYEGNHTHPTS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03407 182 Pfam WRKY DNA -binding domain 123 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g03407 182 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 23 181 - -
Aip07g03407 182 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 181 IPR044810 GO:0003700
Aip07g03407 182 MobiDBLite consensus disorder prediction 46 107 - -
Aip07g03407 182 SUPERFAMILY WRKY DNA-binding domain 115 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g03407 182 SMART WRKY_cls 122 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip07g03407 182 MobiDBLite consensus disorder prediction 78 98 - -
Aip07g03407 182 MobiDBLite consensus disorder prediction 1 34 - -
Aip07g03407 182 Gene3D WRKY domain 109 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip07g03407 182 ProSiteProfiles WRKY domain profile. 117 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03407 Aip-Chr7 123809146 123810875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03407 48 181 WRKY Transcription Factor Family AT5G26170 47.945 5.50e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip07g03407 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03407 - - adu:107461015 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03407 07 123809146 123810875 Aip07g03407 07 123809146 123810875 ECH