Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03400 ATGACAAATGGAGTGGCTGCCGCAATGACACGCGTTGAGAGAGACTGCCCAGGAAAGCTAGCTTTCTGCTTTGCAACAGAATATGGGTCCCACACACTTTTATTTGTCGGTTACTTTTCAGGTGTTTATGTTTCTAACGTTGGATTAAGTCCCCACATCTTCGACGCTGCCGAACCTGAAGAAGCCTTCTTCGTCCACCGCCGGACCGTGTCAAACGGCTGTTTGTCGCGCGTCGCCCACGTGCTGACCCCGACGGTGATCCCACTCTGGTCGCCTGAGGATTTCAAGATGGATGCGAATGGAGGTGAGGCGATAGGGGAGTGCGGGGGTGGTGTAAGTGACGTGAACGAGGAGATGAATGCGGAAGAGGTTGGTGGTGATGAGGTTCAGGAGGAACATTTGCCTGAAGGAGAACCAGGGTTTGACTTGGGCGCGGATGATATTTTGAACCAAGTTTGGAACAGTGTGGAAGATGCATATGAGTTTTATCGAAGGTATGGAAGAGTCAACGGATTTGGGGTACGGAAAGGGGACTCAGATAAAGATAGCCACGGTAATGTTGTGAGATATCGATTTTTTTGTAACAAGGAAGGATTGAGGGAAATCAAGCACTATAACAGGATTGATAGGCAGCGGGGACACAAAGCAGAAACACGGACTGGATGCAAAGCAATGCTGTCAATATACTTGGAGAAGAGTGAGCAGAAGTGGAAGGTTAGGAAGGTAGTACTGGATCACAACCATGACCTAGCACCTGTTGGGATGTCCTACCTGATTCGCAGTCATCACAAAATGACGGACGCGGCAAAGGCTCACATTGACGGGATGCATGCGTATGGAATTGGGACGTCGAAAATCTTGGGTCACATGGATGGTATGTCAGGTGGATACTCTTTGTTAGGATTTTTGAAAAAGGATGCGTACAACTACGCGGACAAGATGAGGCGGTCACGAATAGCTGATGGTGATGCGAATGCAACGTTGGTTTACCTTGAGGGAAAGGCTGCTGTTGACCCTATGTATGTTGCACGCTACAACCTCACAAAAGATGAAAGGCTTGGTAACATGGTTTGGGCTGATGGGAATAGCCGGTCTGATTTTCAGTGTTTTGGAGATGTCTTAGCGTTTGACTCCACTTATAGAAAAAATAGATACAAACGTCCAGTAGTGATTTTTTCAGGCTCAAACAACCATAAGCAAACTACTATTTTTGGTTTTGGGTTGTTGATTGATGAAACAGTCTCGTCGTATACGTGGATGTTACAGAATTTGCTAGAGGTTATGTGCCAAAAGAAACCTTGTGTAGTTGTTACTGACGGGGACAAAGCAATGATAAAAGCTGTGAAGTCGGTTTTACCTGAGGCAACCCATCGTTTGTGTGCGTGGCATGTGGAAAAAAACGTGACATCAAATGTAAAAGACGAACGCCTCCGCAGTTTGTTCAAGCGTTGGTTGTACATGGACATGGAGGTTAATGAATTCGAAGAGGATTGGGCTGCAGCAATTGAAGAGTTTGGGCTGCAAGACAGTAGTTGGGCAAGGCACATGCATGAGAAGCGAAAGCTATGGGCAAACGCGTATTTGCGTGACAAGTTTTGCGCCGGATTCCGGACTACGTCGCGATGTGAGGGAATAAATGCTGTGGTTAACAAATTTTCGAAGTCAAGCCATACTATCCTCGAGTTAGTGCAAAATCTAGAGCTAGTCGTCCGTGAATATCGGAACAAAGAGATGTTGCTACAGTTTAACTCCATTTACACCACTCCGGTTATGACCACATGTTTGAGGTCAATAGAGATAGCTGCTGCTAGTGTTTATACTCGAGAGTTTTTCGCAGATGTTAGGAAAGAGATTGAAGGAGCTGGAGCAGTTAATCTACTTACGAAAAAACGGTGCTTGAATACAACCGTTTATTATCTAGAGGAATATGAGAAACCTGATGTTCAGGTAATGGCCGCCTTCGGGAGAGGTACTGGAAAACTCAACTGTCAATGCTTCTTTTGGGAAAAGAACGGAAAAGATGCCAAAGATACAGATCAATACGGTGACAAGGTGGACGATCCCACCCAAAGAGGTTTTTTGGTTAGACATGGGGCGCTCCACACAAAGGCTCAATGGCTTGTTTACCTTGGTTCACAAGATGAAAATTTGTTTCGAAAAGCAATCGATGGCATAGTTAATTTGTGCAATACTCTGGAATCTGCATGTCGGGGGTTAGGATATGAACGGGACACAAGGGGGACAAAGAAGGTGGTGCGGGATCCCAAGGTTGCGAACCCTAAGGGCGCCCCTCGACTGGCCAAAGAAAGGCAATTAGGCAAGAGAAGGCGATGTGCTAATTGCAAGCACTGGGAACCTAGCCATGGAAATGCTGGAAATTATGCACGGAACCTAGATGACTTAAGGAGACAGTTCGCTGATTCGACCTCCGGCAGCCACGTAGGAAACAATGTGAAGGCAGGATGCACCTTCAATGACGAATGGGCAAACGAGGTTAGGGTCTTTCTCGGAAGAATACAGAAAGGATCACGCAAAGGTTGGGGGAATACCGGTCACTAA 2559 0.4646 MTNGVAAAMTRVERDCPGKLAFCFATEYGSHTLLFVGYFSGVYVSNVGLSPHIFDAAEPEEAFFVHRRTVSNGCLSRVAHVLTPTVIPLWSPEDFKMDANGGEAIGECGGGVSDVNEEMNAEEVGGDEVQEEHLPEGEPGFDLGADDILNQVWNSVEDAYEFYRRYGRVNGFGVRKGDSDKDSHGNVVRYRFFCNKEGLREIKHYNRIDRQRGHKAETRTGCKAMLSIYLEKSEQKWKVRKVVLDHNHDLAPVGMSYLIRSHHKMTDAAKAHIDGMHAYGIGTSKILGHMDGMSGGYSLLGFLKKDAYNYADKMRRSRIADGDANATLVYLEGKAAVDPMYVARYNLTKDERLGNMVWADGNSRSDFQCFGDVLAFDSTYRKNRYKRPVVIFSGSNNHKQTTIFGFGLLIDETVSSYTWMLQNLLEVMCQKKPCVVVTDGDKAMIKAVKSVLPEATHRLCAWHVEKNVTSNVKDERLRSLFKRWLYMDMEVNEFEEDWAAAIEEFGLQDSSWARHMHEKRKLWANAYLRDKFCAGFRTTSRCEGINAVVNKFSKSSHTILELVQNLELVVREYRNKEMLLQFNSIYTTPVMTTCLRSIEIAAASVYTREFFADVRKEIEGAGAVNLLTKKRCLNTTVYYLEEYEKPDVQVMAAFGRGTGKLNCQCFFWEKNGKDAKDTDQYGDKVDDPTQRGFLVRHGALHTKAQWLVYLGSQDENLFRKAIDGIVNLCNTLESACRGLGYERDTRGTKKVVRDPKVANPKGAPRLAKERQLGKRRRCANCKHWEPSHGNAGNYARNLDDLRRQFADSTSGSHVGNNVKAGCTFNDEWANEVRVFLGRIQKGSRKGWGNTGH 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03400 852 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 147 638 IPR031052 GO:0006355
Aip07g03400 852 Pfam FAR1 DNA-binding domain 161 251 IPR004330 -
Aip07g03400 852 Pfam MULE transposase domain 373 467 IPR018289 -
Aip07g03400 852 PANTHER OS02G0262500 PROTEIN 147 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03400 Aip-Chr7 123745729 123750466 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip07g03400 MULE 1.2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03400 - - aip:107633775 1231.47