Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03399 ATGTCTAGTCTTGCAAACTTCATGCTTTGGGTGGCAAGCAAGAAGATAGCAGATGCTAAACTCACGAAAGATTTTCAGGCAATGTTGAAAGAATTTCAGAAGGCACAGTGTCCTGCAGCAGAGAGGGAAACTGCTTACACCCCATTTGTTCCACAAGCTGCTCCATCTAGCTATACAGCTAATGAAGCAGATGCTAATTCTGGTAAGACTCCAGAACAGCGTGCCCTTCTTGTGGAATCCAGAAGGCAGGAGGTCTTGTTTTTATACAATGAGATTGCCTTCAATGAGGCTATCATTGAAGAAAGAGAGCATGGCATTCAAGCAATTCAGCAGCAAATTGGTGAAGTAAATGAAATTTTTAAAGACCTTGATGTGCTTGTGCATGAACAAGGAACTATGAATGGTTTAGTTGTTATTTCTCATCCTATGGTTTAG 435 0.4115 MSSLANFMLWVASKKIADAKLTKDFQAMLKEFQKAQCPAAERETAYTPFVPQAAPSSYTANEADANSGKTPEQRALLVESRRQEVLFLYNEIAFNEAIIEEREHGIQAIQQQIGEVNEIFKDLDVLVHEQGTMNGLVVISHPMV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03399 144 SUPERFAMILY t-snare proteins 14 131 IPR010989 GO:0016020|GO:0016192
Aip07g03399 144 CDD SNARE_Qa 99 133 - -
Aip07g03399 144 PANTHER SYNTAXIN OF PLANTS PROTEIN 12 133 - -
Aip07g03399 144 Gene3D - 10 50 - -
Aip07g03399 144 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 96 133 IPR000727 -
Aip07g03399 144 PANTHER SYNTAXIN 12 133 IPR045242 -
Aip07g03399 144 Gene3D - 97 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03399 Aip-Chr7 123740865 123742341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03399 13 133 SNARE and Associated Proteins AT5G46860 75.410 1.38e-57 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03399 - K08488 aip:107608492 222.631