Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03389 ATGTCCAAGATACCCCTCCGCATTCGCAAGTTCTCTCTACATTTCTTCTTCTTGCTTACCCTCACACTGTCCTCCGATGTCATTTCACAAACCACCGAACAAACCACCCTTCTCACCTTCAAACGCCAACTAGGCGATCCGCCGTCACTACAATCATGGCAACCGTCGCCGTCGTCGTCTCCGTGCGGGTGGCAGGAAGTCCGGTGCGCCGGTGGCACAGTCACGGAGCTTCTCCTCGCCAATAAGGATATCACCGTGAAGAACCTCCCGGCGCCGACGATATGCGACGGCCTCAGGAACCTCACGAAGCTCGACCTCTCCAACAACTCTATCTCCGGTGAGTTTCCGACCTTACTCTACAATTGCTCCAATCTCAACTACCTCGACCTCTCACAGAACTACCTGGCCGGAAAAATTCCCGACGACGTCGACCGCCTCAGAACCCTAACGTACCTCAACCTTGGCGGCAACAGCTTCATTGGCGACGTTCCTCCGGCCATCGGAAACCTTCCGGAACTCAGAACCCTCCACCTCTTCCAGAACAACTTCAACGGAACGTTAGCAAAAGAAATCGGAAACCTCTCCAATCTGGAAATCCTTGGTCTTGCCTTTAATTACCGTCTTGCCCCTGCGCCGATCCCGGTCGACTTTGGGAACCTGACGAACCTGAAGTTCATGTGGCTGAGACAGTGCAACTTGACCGGAGAGATTCCCCAGAATTTCGCGAAACTCGAGAATCTTGAAAAGTTGGATTTGTCAATGAACAACTTAACAGGGAGAATTCCTACTAGCTTGTTTTCTTTAAGAAATTTGACGTTTTTGTATCTGTACCACAATAAGTTGTTTGGTGAGATACCAAATTCGGTGCAAGCTTTGAACCTGGCTGGAGTTGATTTGAGCATGAACAATTTGACAGGTTCTATACCAAAAGATTTTGGAAAGTTGAACAACTTGACGGCTTTGCTGCTGTATTATAACCAGTTGAGTGGTGAGATTCCAAATGGTTTAGGATTATTACCAAAGCTTAGTAATTTTAGTGTTTTTGGGAACAAACTGAATGGAACTCTGCCTCCGGAATTCGGCAGGCATTCGAGGCTGGTGGGGTTTGAGGTTGACAGCAATCAGTTGAGTGGAGGGCTGCCGGAGCATTTGTGCGACGGCGGTGCTCTGAGGGGTGTGGTGGCTTTCTCCAATGATCTGAGTGGTGACTTGCCTCAATGGCTTGGGAATTGTAGTTCTCTTGTCACAGTTCAGCTTCACAATAACAGGTTCTCAGGGGAGGTTCCTTTGAGTTTGTGGACTTCGAGGAGCCTTGAGAGCTTGATGCTGAGCAACAACTCGTTTTCCGGTCAGATTCCAAGAGAATTGTCCCGGAGTATGACAAGGTTGGAGATCAGAGACAACAAGTTTTCTGGTCCAATATTGCTTGGTGTTTCTTCTGTTGTGAATCTTGTGGTTTTTAAGGCAGGAAACAACATGCTTTCCGGTGAGATTCCAAGAGAATTGACCGGTATTTCTCAGATGACAACTCTCATGCTTGATGGGAATCAACTTTCCGGTACGCTTCCATCCGACATAATTTCATGGAAGTCGTTGAACACTTTAACCCTATCAAGAAACAACCTTTCAGGTCAAATCCCACTAGCTATGAGTACTCTTCCTAGTCTGGTTTACTTGGATTTGTCTGAAAATGAGTTGTCTGGTGAAATACCAACTCAGTTAGGCGACTTGAGGTTTGTTTTTCTCAACTTGTCCTATAATAAGCTTTCTGGGAACATACCAGATGAGCTTAACAACCTCGCCTATGAAAGTAGTTTCTTGAACAATCCCAATCTGTGTGCTTATGATCCAAAAGTCAATCTATCTAATTGCTTGACTAAAACCTCATCCCACTCCAGCAATTCATCTAAAAAAATCTTTGCCTTGATTCTTGGGGTCATCCTCATTGTATTGTTAGCCGCTGCCCTCTTGGCATTGTGCAAGCTGACAAAGCAACGGGGTAAAAAGCTGCGTTGTGGCCGTAAGCTTTCAACATGGAGGCTCACTTCATTCCAGAGGCTTGACCTCACAGAAATTAATCTCTTTTCAAGTTTGACAGACAGCAACCTTATTGGAAGTGGAGGCTTTGGAAAAGTTTACCGGATCGCTTCAAATCGCCCAGGTGAGTATGTTGCTGTGAAGCAGATTTGGAGTGACAGGGATGTGGATCACAAGCGGGAGAAAGAGTTTATGGCTGAGGTTGAAATCTTGGGCAACATTAGGCATTCTAATGTAGTGAAACTCTTGTGTTGCTACTCAAGTGAGAACTCAAAGCTTCTTGTATACGAGTACATGGAAAATCATAGCCTTGACAAATGGCTACATGGAAAGAATAAAAAGTCACCAATTGGTTTGAGTACACCCAACAGGACTCATGCAGTGTTGAGTTGGCCAACGAGGTTGAAGATTGCCATTGGAGCTGCACAAGGCCTATGTTACATGCACCATGAGTGCTCACCATCAATCATCCATCGCGATGTTAAGTCTAGCAATATACTACTAAACTCCGAATTCAAGGCTAGTATAGCAGATTTTGGACTCGCCACGATGCTGTTAAAGCCAGGGGAGCTGCACACCATGTCTGCTTTAGCAGGGTCTTTTGGCTACATTCCACCAGAATATGCTTATTGTAGCAAGATCAATGAGAAAGTCGATGTATATAGTTTTGGGGTTGTGCTCCTAGAGCTTGTGACTGGAAGAGAGCCTAAATGTGGAGAAGATGGAAGCAGCCTAGTTGACTGGGCATGGAGGCAATACAGTGAGGGGAAGTGTCTTGCTGATGCCTTAGATGAGGATATCAAAGAAACATGCCACGTGGAAGATATGACTACTGCCTACAAACTAGGGCTCATTTGCACAAGCTCATTACCCTCATCTAGGCCTTCTACAAGGGAGATTTTGCAAGTTCTTCGTCAGTGTTGTCACCCAGGTTCTTCACGTAAGAGAGTGGCAACTGACTTTGACATAACTCCCCTACTTAGTGATGCTAGGTACATAGCCAGTTACAAGGACAGTAATGTTACAAGCGAGAACGAAGAAAGCCGCTTGTATAGTGTGTAA 3099 0.4592 MSKIPLRIRKFSLHFFFLLTLTLSSDVISQTTEQTTLLTFKRQLGDPPSLQSWQPSPSSSPCGWQEVRCAGGTVTELLLANKDITVKNLPAPTICDGLRNLTKLDLSNNSISGEFPTLLYNCSNLNYLDLSQNYLAGKIPDDVDRLRTLTYLNLGGNSFIGDVPPAIGNLPELRTLHLFQNNFNGTLAKEIGNLSNLEILGLAFNYRLAPAPIPVDFGNLTNLKFMWLRQCNLTGEIPQNFAKLENLEKLDLSMNNLTGRIPTSLFSLRNLTFLYLYHNKLFGEIPNSVQALNLAGVDLSMNNLTGSIPKDFGKLNNLTALLLYYNQLSGEIPNGLGLLPKLSNFSVFGNKLNGTLPPEFGRHSRLVGFEVDSNQLSGGLPEHLCDGGALRGVVAFSNDLSGDLPQWLGNCSSLVTVQLHNNRFSGEVPLSLWTSRSLESLMLSNNSFSGQIPRELSRSMTRLEIRDNKFSGPILLGVSSVVNLVVFKAGNNMLSGEIPRELTGISQMTTLMLDGNQLSGTLPSDIISWKSLNTLTLSRNNLSGQIPLAMSTLPSLVYLDLSENELSGEIPTQLGDLRFVFLNLSYNKLSGNIPDELNNLAYESSFLNNPNLCAYDPKVNLSNCLTKTSSHSSNSSKKIFALILGVILIVLLAAALLALCKLTKQRGKKLRCGRKLSTWRLTSFQRLDLTEINLFSSLTDSNLIGSGGFGKVYRIASNRPGEYVAVKQIWSDRDVDHKREKEFMAEVEILGNIRHSNVVKLLCCYSSENSKLLVYEYMENHSLDKWLHGKNKKSPIGLSTPNRTHAVLSWPTRLKIAIGAAQGLCYMHHECSPSIIHRDVKSSNILLNSEFKASIADFGLATMLLKPGELHTMSALAGSFGYIPPEYAYCSKINEKVDVYSFGVVLLELVTGREPKCGEDGSSLVDWAWRQYSEGKCLADALDEDIKETCHVEDMTTAYKLGLICTSSLPSSRPSTREILQVLRQCCHPGSSRKRVATDFDITPLLSDARYIASYKDSNVTSENEESRLYSV 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03389 1032 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 17 999 - -
Aip07g03389 1032 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Aip07g03389 1032 Pfam Leucine rich repeat 507 566 IPR001611 GO:0005515
Aip07g03389 1032 Pfam Leucine rich repeat 225 281 IPR001611 GO:0005515
Aip07g03389 1032 Gene3D Ribonuclease Inhibitor 293 385 IPR032675 -
Aip07g03389 1032 SUPERFAMILY Protein kinase-like (PK-like) 692 983 IPR011009 -
Aip07g03389 1032 Gene3D Phosphorylase Kinase; domain 1 680 777 - -
Aip07g03389 1032 SMART serkin_6 698 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03389 1032 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Aip07g03389 1032 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 17 999 - -
Aip07g03389 1032 SUPERFAMILY L domain-like 290 602 - -
Aip07g03389 1032 Pfam Protein kinase domain 700 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03389 1032 PRINTS Leucine-rich repeat signature 244 257 - -
Aip07g03389 1032 PRINTS Leucine-rich repeat signature 101 114 - -
Aip07g03389 1032 SUPERFAMILY L domain-like 44 381 - -
Aip07g03389 1032 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Aip07g03389 1032 Gene3D Ribonuclease Inhibitor 459 645 IPR032675 -
Aip07g03389 1032 Gene3D Ribonuclease Inhibitor 30 185 IPR032675 -
Aip07g03389 1032 Gene3D Ribonuclease Inhibitor 186 292 IPR032675 -
Aip07g03389 1032 Gene3D Ribonuclease Inhibitor 386 458 IPR032675 -
Aip07g03389 1032 ProSiteProfiles Leucine-rich repeat profile. 100 122 IPR001611 GO:0005515
Aip07g03389 1032 ProSiteProfiles Protein kinase domain profile. 698 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g03389 1032 SMART LRR_typ_2 553 577 IPR003591 -
Aip07g03389 1032 SMART LRR_typ_2 315 339 IPR003591 -
Aip07g03389 1032 SMART LRR_typ_2 98 122 IPR003591 -
Aip07g03389 1032 SMART LRR_typ_2 244 268 IPR003591 -
Aip07g03389 1032 SMART LRR_typ_2 170 194 IPR003591 -
Aip07g03389 1032 SMART LRR_typ_2 505 529 IPR003591 -
Aip07g03389 1032 SMART LRR_typ_2 436 459 IPR003591 -
Aip07g03389 1032 Gene3D Transferase(Phosphotransferase) domain 1 778 1001 - -
Aip07g03389 1032 ProSitePatterns Protein kinases ATP-binding region signature. 704 727 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03389 Aip-Chr7 123593349 123596613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03389 27 1006 Receptor kinase-like Gene Family AT5G25930 54.425 0.0 1024
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip07g03389 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03389 K00924 - adu:107461025 1923.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g03389 07 123593349 123596613 Aip07g03389 07 123593349 123596613 ECH