Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03387 ATGTTACTGCTGATTATTAATTTTGCTTCTCTACTGGCTGTCATCTATGCACATAACACTTATTATTTGGAATTTTATTTTTGCAATTGCAGCTATACAGCTAATGAAGCAGATGCTAATTCTGGTAAGACTCCAGAACAGCGTGCCCTTCTTGTGGAATTCAGAAGGCAAGAGGTCTTGTTTTTAGATAATGAGATTGTCTTCAATGAGGCTATCATTGAAGAAAGAGAGCATGGCATTCAAGCAATTCAGCAGCAAATTGGTGAAGTAAATGAAATTTTTAAAGACCTTGCTGTGCTTGTGCATGAACAAGGAACTATGATTGGTTTAGTTGTTATTTAG 342 0.3596 MLLLIINFASLLAVIYAHNTYYLEFYFCNCSYTANEADANSGKTPEQRALLVEFRRQEVLFLDNEIVFNEAIIEEREHGIQAIQQQIGEVNEIFKDLAVLVHEQGTMIGLVVI 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03387 113 Gene3D - 29 111 - -
Aip07g03387 113 PANTHER SYNTAXIN 28 109 IPR045242 -
Aip07g03387 113 SUPERFAMILY t-snare proteins 55 108 IPR010989 GO:0016020|GO:0016192
Aip07g03387 113 CDD SNARE_Qa 73 108 - -
Aip07g03387 113 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 70 113 IPR000727 -
Aip07g03387 113 PANTHER SYNTAXIN OF PLANTS PROTEIN 28 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03387 Aip-Chr7 123567598 123568330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03387 20 108 SNARE and Associated Proteins AT5G46860 64.045 5.92e-32 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03387 - K08488 aip:107608492 149.058