Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03359 ATGCCAACAAACTCGCAGCAACAGTTTCACGCCTTCTACGAAGGATGGATCCAACGCAAACAGACTCTCCTCGACGAGCTTCTCACACTTTCCAACGCTCCCGACTCCCAACACAAACACACCGCTCTCATTGAATCCGTTATCTCCCACTACCAACAATACTTCGAGCACAAAACACGCCTCCAAAACGACGACGTTTTGCTTCTCTTCTCTCCCACCTGGCTCTCCACCTACGAGCGAGCACTTCTGTGGATGGGAGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGTGGCTAGTCCGCGCGTGTTGCAACGCGCTAGGAGAGTGGGGAGGTTGTTGGATGGGGAGATTGATGAGCTTGATGAGTCTATGGGGGGGATGAGGAACGCCGTGGGAGAGCTTTTTCAGAGAGCGGATGAGTTGAGGGTGGCTACGGTTAGCAAGGTCGTGGCGGTTCTTTCTCCGCCGCAGACGGTTAGGTTTCTTGCCGCGGCCTTAGGGTTTCAGCTACGTGTCAGGCGGTGGGGGCTGGAAAGGGACCAGTCCCGTTGA 558 0.5251 MPTNSQQQFHAFYEGWIQRKQTLLDELLTLSNAPDSQHKHTALIESVISHYQQYFEHKTRLQNDDVLLLFSPTWLSTYERALLWMGDXXXXXXXXXXSVASPRVLQRARRVGRLLDGEIDELDESMGGMRNAVGELFQRADELRVATVSKVVAVLSPPQTVRFLAAALGFQLRVRRWGLERDQSR 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03359 185 Pfam Seed dormancy control 24 87 IPR025422 GO:0006351|GO:0043565
Aip07g03359 185 ProSiteProfiles DOG1 domain profile. 6 184 IPR025422 GO:0006351|GO:0043565
Aip07g03359 185 PANTHER TRANSCRIPTION FACTOR HBP-1B 98 184 - -
Aip07g03359 185 PANTHER TRANSCRIPTION FACTOR HBP-1B 3 87 - -
Aip07g03359 185 PANTHER - 98 184 - -
Aip07g03359 185 PANTHER - 3 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03359 Aip-Chr7 123125961 123126518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g03359 9 175 bZIP Transcription Factor Family AT5G06950 22.439 4.04e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03359 - - aprc:113865861 166.007