Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g03351 ATGTTCAAGGTTATACACAGCTATGTATTAGAGGGTTTGAACTTTGAAGGCGAATATTTCTACATTGAAAGGACTCTGATGGTAGACAATTATTTACTTGTTACAAGGACAACAATTAGGGTACTACGGCAAATTGAAAGAACAGATGGAAACCCTAACGGACTAGCCGCGCACCCACCGCAACCACCGCAGCCCCACAACCCCGCGGAACCCACAGACACTGGATCTCCTCTGCTCGAGCGTGCTTTCTCTCTGTTCGCCGGTGTCGCACCGTGGAAGCTCCGTCGCCGTCGCAGGAGCTGTGTCGCCATCGTAGGAAGCTCCGTCACCGTCCTAGGAAGCTGTGTCGCCGTTGTAGGAAGCTCCCTCGCCGTCGCGTGGAAGCTCTGTGGCCATCACCGTCTCTCCTGTTCAAGCGCTCTCTCTCTCTGTGTTCGCCGGTGTGGCCGTGTCCTTTGTCGTCGCCGTCACTCCCCTTCCTCCTCGCTGCCGGGAAGCACTGCTGTGAGGAAGGAAATTTCAGATGAAACAGATCGCATAACTGGGAAGACGAAACAAATTTCTAACATTCCAATTCAACTCAGCATTTATTCGCCACATGTTGTAAACTTAACCCTTATAGATCTTCCTGGGTTGACAAAGGTTGCAGTAGGTAAACCTCAAAATAGGCCCGCTTGCTCCTCCTTCACCAACCGAATCTCCATTCAGTTTCCTCTTCGTCTCTGTTCGAAGTTGGAAGCCTTTGCACACTCTGCAACTTCAAGCGCATACTCTGCAATTTCAATGCTCACAAGAAGAAAAATCCTCAATTTATTCTCAACCCAATTCGCTTCTCACCAATTCAATGCAGTTTCGAAGTTGTCACGAGTTCCTTCGCACCCTTATTCTGAAATCCACAAAACCCTAAACCCCTTTAGGGTTTTTCTTTTGTGTGCATGGAATTCGACGCAGGCATCGAAATTTCCCGAATACGAGATGCCATCGGTGACGTGGGGTGTGATTCAAGGTCGCAAGGAGAAGCTGGTATCGCGGGTCATCGTATTCGACTTCCTCAGGGGTTTGGGAATCGTCCCTGACGAGTTGCAGGACCTTGAGCTACCTTCGACAGTTGAAGTCATGAGGGAGCGCGTGGAGTTCCTCCAGAAACTAGGGCTAACAATTGATGACATCAACGATTACCCTTTGATGTTGGGATGCAGTGTGAGGAAGAACATAATTCCTGTTTTGGGGTACTTGGAAAAAATTGGGATTTCAAGATCCAAACTTGGGGGATTCATTAAGAGCTACCCGCAGGTATTGCATGCTAGTGTGATTGTTGAGCTTGTCCCTGTTGTGAAGTTCCTTAGGGGACTTGATGTGGAGAGGGAGGATATTGGGTATGTGTTGCAGAAGTACCCTGAACTTCTAGGGTTCAAGCTTGAGGGTACTATGAGTACATCAGTGGCTTATCTTGTTAGTATTGGGGTTAATCCTAGGGATATTGGTCCCATGGTGACTCAGTATCCTTATTTTTTGGGGATGAGAGTTGGGACTATGATCAAGCCTTTTATTGATTACTTAGTCTCTTTGGGACTGCCAAAGAAGATTTTGGCTAAGATGTTGGAGAAGAGGACCTATTTGCTTGGATATGATCTTGAAGAGACTATCAAGCCAAATGTGGATTGTTTGATTAGCTTTGGGATAGGGAGGGAGTGTTTGCCTTCGGTTATTGCACAGTATCCTCAGATTCTTGGATTGCCCCTCAAAGCCAAGTTGTCTTCGCAGCAGTACTTCTTCAGTTTAAAGCTTAAGATTGATCCTGAAGGTTTTGCGCGAGTCGTGGAGAAGATGCCGCAGGTGGTTAGCCTTCACCAAAACGTGATCATGAAGCCGGTCGAGTTCCTCCTCGGAAGGGCTATAGCACTGCATGATGTGGCTAGCATGGTGGTCAAGTGTCCGCAGTTAGTAGCACTGAGAGTGGAGCTCATGAAGAACAGTTTTTACTTCTTTAAGAGTGAGATGGGAAGACCACTGAAAGAGCTTGTAGAGTTCCCTGAATACTTTACTTACAGTCTGGAGTCTAGGGTCAAACCAAGATACCAAAGGCTAAAGAGCAAGGGGATAAGGTGTTCATTGAATTGGATGCTGAATTGTAGTGACCAGAGATTTGAAGAGAGGTTGCAGGGTAATTATATTGAGACTGAAAGTATAGGTCCGACATTTTTAATGGGTGGAAAATTGAACCTGCCAGGTAATGCAATTCTTTCAGATGAGGAAGAGGAGAGTGATGATGAAGTACTATACCGAAGAACTGTTTCTTTATAG 2304 0.4657 MFKVIHSYVLEGLNFEGEYFYIERTLMVDNYLLVTRTTIRVLRQIERTDGNPNGLAAHPPQPPQPHNPAEPTDTGSPLLERAFSLFAGVAPWKLRRRRRSCVAIVGSSVTVLGSCVAVVGSSLAVAWKLCGHHRLSCSSALSLCVRRCGRVLCRRRHSPSSSLPGSTAVRKEISDETDRITGKTKQISNIPIQLSIYSPHVVNLTLIDLPGLTKVAVGKPQNRPACSSFTNRISIQFPLRLCSKLEAFAHSATSSAYSAISMLTRRKILNLFSTQFASHQFNAVSKLSRVPSHPYSEIHKTLNPFRVFLLCAWNSTQASKFPEYEMPSVTWGVIQGRKEKLVSRVIVFDFLRGLGIVPDELQDLELPSTVEVMRERVEFLQKLGLTIDDINDYPLMLGCSVRKNIIPVLGYLEKIGISRSKLGGFIKSYPQVLHASVIVELVPVVKFLRGLDVEREDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTMIKPFIDYLVSLGLPKKILAKMLEKRTYLLGYDLEETIKPNVDCLISFGIGRECLPSVIAQYPQILGLPLKAKLSSQQYFFSLKLKIDPEGFARVVEKMPQVVSLHQNVIMKPVEFLLGRAIALHDVASMVVKCPQLVALRVELMKNSFYFFKSEMGRPLKELVEFPEYFTYSLESRVKPRYQRLKSKGIRCSLNWMLNCSDQRFEERLQGNYIETESIGPTFLMGGKLNLPGNAILSDEEEESDDEVLYRRTVSL 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g03351 767 PANTHER EXPRESSED PROTEIN 309 750 - -
Aip07g03351 767 SMART mt_12 387 418 IPR003690 GO:0003690|GO:0006355
Aip07g03351 767 SMART mt_12 567 599 IPR003690 GO:0003690|GO:0006355
Aip07g03351 767 SMART mt_12 604 634 IPR003690 GO:0003690|GO:0006355
Aip07g03351 767 SMART mt_12 671 702 IPR003690 GO:0003690|GO:0006355
Aip07g03351 767 SMART mt_12 639 670 IPR003690 GO:0003690|GO:0006355
Aip07g03351 767 SMART mt_12 495 526 IPR003690 GO:0003690|GO:0006355
Aip07g03351 767 SMART mt_12 423 454 IPR003690 GO:0003690|GO:0006355
Aip07g03351 767 SMART mt_12 531 562 IPR003690 GO:0003690|GO:0006355
Aip07g03351 767 SMART mt_12 459 490 IPR003690 GO:0003690|GO:0006355
Aip07g03351 767 MobiDBLite consensus disorder prediction 50 74 - -
Aip07g03351 767 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 219 IPR027417 -
Aip07g03351 767 Gene3D - 134 227 IPR027417 -
Aip07g03351 767 SMART dynamin_3 95 301 IPR001401 GO:0003924|GO:0005525
Aip07g03351 767 PANTHER CGI-12 PROTEIN-RELATED 309 750 IPR003690 GO:0003690|GO:0006355
Aip07g03351 767 Gene3D Transcription termination factor 3, mitochondrial 374 512 IPR038538 -
Aip07g03351 767 Gene3D Transcription termination factor 3, mitochondrial 513 727 IPR038538 -
Aip07g03351 767 MobiDBLite consensus disorder prediction 56 70 - -
Aip07g03351 767 Pfam mTERF 409 717 IPR003690 GO:0003690|GO:0006355
Aip07g03351 767 Pfam Dynamin family 167 219 IPR045063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g03351 Aip-Chr7 123024509 123029567 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip07g03351 mTERF 2.1e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g03351 K15032 - gmx:100809590 831.247